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hiball-launch.html
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<!doctype html>
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<section class="extra-pad">
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<h1 class="full-width text-center">Fourth BigBrain Workshop and Launch of HIBALL</h1>
<h2 class="full-width text-center">June 26, 2020 Virtual Meeting</h2>
<div>
<div class="">
<p>On June 26th we officially launched HIBALL with the virtual 4th BigBrain Workshop. Our distinguished guests in the opening session spoke warmly and inspiringly about the collaboration between McGill’s Neuro (Montreal Neurological Institute and Hospital) and Forschungszentrum Jülich, and commended the exciting future developments of the BigBrain project.</p>
</div>
<div class="col-2">
<img src="images/hiball-plaque.png" class="hiballlaunch">
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<iframe width="530" height="315" src="https://www.youtube.com/embed/yPMecMspogM" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
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<div class="clear-all"></div>
<div>
<p>Our guests at the opening session: Otmar Wiestler, President, Helmholtz Association, Germany; Sabine Sparwasser, German Ambassador to Canada; Martha Crago, Vice-Principal Research and Innovation, McGill University, and Chair of Board of Directors HBHL; Wolfgang Marquardt, CEO Forschungszentrum Jülich, Germany; Rémi Quirion, Chief Scientist of Québec; Pawel Swieboda, Director General of HBP, and CEO EBRAINS</p>
</div>
<div class="flex-baseline hiball-gallery spacer">
<a href="https://youtu.be/uFFLdFHhSgk?t=468"><img src="images/hiball-otmar.png"></a>
<a href="https://youtu.be/uFFLdFHhSgk?t=74"><img src="images/hiball-sabine.png"></a>
<a href="https://youtu.be/uFFLdFHhSgk?t=1142"><img src="images/hiball-martha.png"></a>
<a href="https://youtu.be/uFFLdFHhSgk?t=1441"><img src="images/hiball-wolfgang.png"></a>
<a href="https://youtu.be/uFFLdFHhSgk?t=1750"><img src="images/hiball-remi.png"></a>
<a href="https://youtu.be/uFFLdFHhSgk?t=1999"><img src="images/hiball-pawel.png"></a>
</div>
<div class="">
<p >The scientific program was highly appreciated and time for discussion was well used by the audience. We thank our speakers for their valuable contributions and look forward to exciting developments around the BigBrain in the near future. Please stay tuned via <a href="https://bigbrainproject.org">bigbrainproject.org</a> and follow us on twitter <a href="https://twitter.com/bigbrainproject">@BigBrainProject.org</a></p>
</div>
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</section>
<section class="lt-grey-bg">
<div class="section-content">
<h2 class="full-width text-center">Participants</h2>
<table class="overview">
<tbody>
<tr>
<td>156 Registrants</td>
<td>22 Countries</td>
<td>100 Joining Live</td>
<td>40 Watching Live on Youtube</td>
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</tbody>
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<td class="tg-0lax">Canada</td>
<td class="tg-lqy6">57</td>
</tr>
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<td class="tg-0lax">China</td>
<td class="tg-lqy6">3</td>
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<td class="tg-0lax">Croatia</td>
<td class="tg-lqy6">3</td>
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<td class="tg-0lax">Cuba</td>
<td class="tg-lqy6">1</td>
</tr>
<tr>
<td class="tg-0lax">Dominica</td>
<td class="tg-lqy6">1</td>
</tr>
<tr>
<td class="tg-0lax">France</td>
<td class="tg-lqy6">3</td>
</tr>
<tr>
<td class="tg-0lax">Germany</td>
<td class="tg-lqy6">48</td>
</tr>
<tr>
<td class="tg-0lax">Iceland</td>
<td class="tg-lqy6">1</td>
</tr>
<tr>
<td class="tg-0lax">India </td>
<td class="tg-lqy6">5</td>
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<td class="tg-0lax">Iran</td>
<td class="tg-lqy6">1</td>
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<td class="tg-0lax">Italy </td>
<td class="tg-lqy6">1</td>
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<td class="tg-0lax">Mexico</td>
<td class="tg-lqy6">2</td>
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<td class="tg-0lax">Netherlands</td>
<td class="tg-lqy6">1</td>
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<tr>
<td class="tg-0lax">Poland</td>
<td class="tg-lqy6">2</td>
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<tr>
<td class="tg-0lax">Potugal</td>
<td class="tg-lqy6">2</td>
</tr>
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<td class="tg-0lax">Singapore</td>
<td class="tg-lqy6">1</td>
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<td class="tg-0lax">Spain</td>
<td class="tg-lqy6">22</td>
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<td class="tg-0lax">Sweden</td>
<td class="tg-lqy6">1</td>
</tr>
<tr>
<td class="tg-0lax">United Kingdom</td>
<td class="tg-lqy6">4</td>
</tr>
<tr>
<td class="tg-0lax">United States</td>
<td class="tg-lqy6">15</td>
</tr>
</tbody>
</table>
</div>
<div class="clear-all"></div>
</div>
<div class="clear-all"></div>
</section>
<section class="med-grey-bg">
<div class="section-content end">
<h2 class="full-width text-center">Program and material <br>
<p class="hiball-title-link">Please find the event webpage with full program, abstracts, and information about our speakers <a href="https://www.mcgill.ca/neuro/channels/event/virtual-fourth-bigbrain-workshop-launch-helmholtz-international-bigbrain-analytics-and-learning-320401">here.</a></p></h2>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="530" height="315" src="https://www.youtube.com/embed/uFFLdFHhSgk" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://www.youtube.com/watch?v=uFFLdFHhSgk">Opening Remarks</a></h3>
<p>Various Speakers</p>
<p>Introductory comments by
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=74s">Sabine Sparwasser</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=469s">Otmar Wiestler</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=1140s">Martha Crago</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=1440s">Wolfgang Marquardt</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=1748s">Rémi Quirion</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=1999s">Pawel Swieboda</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=2429s">Katrin Amunts</a>,
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=3119s">Alan Evans</a>, and the
<a href="https://www.youtube.com/watch?v=uFFLdFHhSgk&t=3649s">HIBALL Launch Video</a>.
</p>
<!-- <a href="" class="hiballlaunch-button"><button>material</button></a> -->
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="560" height="315" src="https://www.youtube.com/embed/OmSu7Z6KoFE" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://youtu.be/OmSu7Z6KoFE">Towards automated mapping of cytoarchitectonic areas using Deep Learning</a></h3>
<p>Timo Dickscheid</p>
<p>Forschungszentrum Jülich, Structural and functional organisation of the brain (INM-1)
</p>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Dickscheid.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="560" height="315" src="https://www.youtube.com/embed/uvqXrzggIfs" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://youtu.be/uvqXrzggIfs">Large-scale spiking neural network models of resting-state dynamics in primate cortex</a></h3>
<p>Sacha van Albada</p>
<p>Forschungszentrum Jülich, Computational and Systems Neuroscience (INM-6)
</p>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-vanAlbada.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="560" height="315" src="https://www.youtube.com/embed/O4RKloyyaE8" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://youtu.be/O4RKloyyaE8">BigBrain atlas of cortical layers: Linking cortical microstructure to in vivo measures of cortical structure</a></h3>
<p>Konrad Wagstyl</p>
<p>University College London
</p>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Wagstyl.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="560" height="315" src="https://www.youtube.com/embed/pcJRCpBJd20" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://youtu.be/pcJRCpBJd20">Large-scale cortical gradients revealed by examination of intracortical microstructurex</a></h3>
<p>Casey Paquola</p>
<p>McGill University, Montreal Neurological Institute and Hospital
</p>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Paquola.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="560" height="315" src="https://www.youtube.com/embed/6k-jbMjzEOg" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://youtu.be/6k-jbMjzEOg">Data-driven parcellation and computational methods for generalizing results from the 3D BigBrain hippocampus to in-vivo MRI</a></h3>
<p>Jordan DeKraker</p>
<p>Western University
</p>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-DeKraker.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
<iframe width="560" height="315" src="https://www.youtube.com/embed/tQJxK1xgTKs" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
</div>
<div class="hiballlaunch-description col-3">
<h3><a href="https://youtu.be/tQJxK1xgTKs">Towards an ultra-high resolution 3D neurotransmitter receptor atlas</a></h3>
<p>Thomas Funck</p>
<p>Forschungszentrum Jülich, Structural and functional organisation of the brain (INM-1)
</p>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Funck.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
</div>
</div>
<div class="hiballlaunch-card">
<div class="hiballlaunch-vid col-4">
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<h3><a href="https://youtu.be/W8ljch7P9Mg">Workflow integrating The Virtual Brain (TVB) with data features of the Big Brain</a></h3>
<p>Huifang Wang</p>
<p>Institut de Neurosciences des Systèmes, Marseille
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<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Wang.pdf" class="hiballlaunch-button"><button>PDF of Slides</button></a>
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<h3><a href="https://youtu.be/yM0I_4arCWU">Lightning Talks </a></h3>
<p>Various Speakers</p>
<p class="lightning-talks">Lightning talks by:
<ul>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=20s">Sherri Lee Jones</a> <br>
An Atlas of the Human Hypothalamus at Ultra-High Resoluton using the BigBrain<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Jones.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=235s">Lindsay Lewis</a><br>
An updated MSM surface registration pipeline to bridge atlases across the BigBrain and FS / HCP worlds<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Lewis.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=476s">Jessica Royer & Casey Paquola</a><br>
Myeloarchitecture gradients in the human insula: Histological underpinnings and association to intrinsic functional connectivity<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Royer.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=707s">Roxana Kooijmans & Markus Axer</a><br>
Quantitative whole-brain multi-modal fibre and cell mapping in primates<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Kooijmans.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=923s">Jorge Bosch-Bayard</a><br>
From BigBrain to EEG/MEG source localization: alignment of neural generators with multimodal data<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-BoschBayard.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=1240s">Pedro Valdes-Sosa</a><br>
Precise Electrophysiological Connectivity with the Virtual BigBrain<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Valdes-Sosa.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=1418s">Jorge Riera Diaz</a><br>
EEG signatures of Ca2+ resonance in cortical pyramidal neurons from monkeys to the Big Brain<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Riera.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=1750s">Kamil Uludag</a><br>
From BigBrain to fMRI: the role of hemodynamic modeling<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Uludag.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=1955s">Katja Heuer & Roberto Toro</a><br>
What is it like to be a Giant anteater? Cytoarchitectonic analysis of open data with MicroDraw<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Heuer_Toro.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=2270s">Mona Omidyeganeh & Claude Lepage</a><br>
Non-linear registration of 1μm Histology Sections into 3D 20μm BigBrain Space<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Omidyeganeh.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=2520s">Valerie Hayot-Sasson</a><br>
A hierarchical file system for efficient pipeline processing on HPC<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Hayot.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=2800s">Chadi Barakat</a><br>
Modular computing architecture for cellular BigBrain<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Barakat.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=3052s">Christian Schiffer</a><br>
Convolutional Neural Networks for Efficient Mapping of Cytoarchitectonic Areas across Full Stacks of Histological Human Brain Sections<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Schiffer.pdf" class="small-button">PDF of Slides</a></li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=3256s">Andrea Brandstetter</a><br>
AI-Supported Cytoarchitectonic Mapping and Visualization of the Lateral Geniculate Body in the BigBrain<br>
<a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Brandstetter.pdf" class="small-button">PDF of Slides</a>,</li>
<li><a href="https://www.youtube.com/watch?v=yM0I_4arCWU&t=3504s">Kai Kiwitz</a> <a href="docs/4th-bb-workshop/20-06-26-BigBrainWorkshop-Kiwitz.pdf" class="small-button">PDF of Slides</a></li>
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