From 2c395baa8055244e3f95f0332ccc715e35a65d1a Mon Sep 17 00:00:00 2001 From: Patrick Capon <137233925+PatCapon39@users.noreply.github.com> Date: Mon, 6 May 2024 14:26:07 +0930 Subject: [PATCH] Add all collection pages and tweak display (#11) * Update and rename data_management-collection.md to data_sharing.md * Create data_collection.md * Create data_reuse * Create Metagenomics.md * Rename data_reuse to data_reuse.md * Create data_analysis.md * Create metabolomics.md * Create data_planning.md * Create genomics.md * Update main.yml * Update resource-table-all.html * Update main.yml * Update main.yml * Update index.md --- .github/workflows/update_library.yml | 6 ++--- _data/sidebars/main.yml | 22 ++++++++++++++++--- _includes/resource-table-all.html | 2 +- index.md | 2 +- pages/Metagenomics.md | 8 +++++++ pages/data_analysis.md | 8 +++++++ pages/data_collection.md | 8 +++++++ pages/data_planning.md | 8 +++++++ pages/data_reuse.md | 8 +++++++ ...nagement-collection.md => data_sharing.md} | 6 ++--- pages/genomics.md | 8 +++++++ pages/metabolomics.md | 8 +++++++ 12 files changed, 83 insertions(+), 11 deletions(-) create mode 100644 pages/Metagenomics.md create mode 100644 pages/data_analysis.md create mode 100644 pages/data_collection.md create mode 100644 pages/data_planning.md create mode 100644 pages/data_reuse.md rename pages/{data_management-collection.md => data_sharing.md} (75%) create mode 100644 pages/genomics.md create mode 100644 pages/metabolomics.md diff --git a/.github/workflows/update_library.yml b/.github/workflows/update_library.yml index f00c173..b69b36e 100644 --- a/.github/workflows/update_library.yml +++ b/.github/workflows/update_library.yml @@ -2,9 +2,9 @@ name: Update library on: - push: - pull_request: - branches: [ main, master ] + #push: + #pull_request: + #branches: [ main, master ] workflow_dispatch: jobs: diff --git a/_data/sidebars/main.yml b/_data/sidebars/main.yml index 6e99c65..b0acaf5 100644 --- a/_data/sidebars/main.yml +++ b/_data/sidebars/main.yml @@ -3,12 +3,28 @@ subitems: url: /index - title: All resources url: /resources - - title: Collections by topic + - title: Collections subitems: + - title: Data management + subitems: + - title: Data analysis + url: /data-analysis + - title: Data collection + url: /data-collection + - title: Data planning + url: /data-planning + - title: Data reuse + url: /data-reuse + - title: Data sharing + url: /data-sharing + - title: Genomics + url: /genomics + - title: Metabolomics + url: /metabolomics + - title: Metagenomics + url: /Metagenomics - title: Proteomics url: /proteomics-collection - - title: Data management - url: /data_management-collection - title: Contact us url: /contact-us - title: Contributors diff --git a/_includes/resource-table-all.html b/_includes/resource-table-all.html index 7fd1901..d5b77b2 100644 --- a/_includes/resource-table-all.html +++ b/_includes/resource-table-all.html @@ -16,7 +16,7 @@ {%- endif %} Description - Topic(s) + Collection(s) Provider diff --git a/index.md b/index.md index 72db350..cdd5820 100644 --- a/index.md +++ b/index.md @@ -19,7 +19,7 @@ The training materials are sorted into collections by broad topic - eg. training The following collections are available: -{% include section-navigation-tiles.html col = "1" type="Collection"%} +{% include section-navigation-tiles.html col = "3" type="Collection"%} ## Acknowledgements diff --git a/pages/Metagenomics.md b/pages/Metagenomics.md new file mode 100644 index 0000000..51fc5aa --- /dev/null +++ b/pages/Metagenomics.md @@ -0,0 +1,8 @@ +--- +title: Metagenomics +type: Collection +page_id: metagenomics +contributors: +description: This page includes all Learning Library content related to metagenomics +affiliations: +--- diff --git a/pages/data_analysis.md b/pages/data_analysis.md new file mode 100644 index 0000000..5c3ea6f --- /dev/null +++ b/pages/data_analysis.md @@ -0,0 +1,8 @@ +--- +title: Data analysis +type: Collection +page_id: data_analysis +contributors: +description: This page includes all Learning Library content related to data analysis +affiliations: +--- diff --git a/pages/data_collection.md b/pages/data_collection.md new file mode 100644 index 0000000..e22f162 --- /dev/null +++ b/pages/data_collection.md @@ -0,0 +1,8 @@ +--- +title: Data collection +type: Collection +page_id: data_collection +contributors: +description: This page includes all Learning Library content related to data collection +affiliations: +--- diff --git a/pages/data_planning.md b/pages/data_planning.md new file mode 100644 index 0000000..5c4a20d --- /dev/null +++ b/pages/data_planning.md @@ -0,0 +1,8 @@ +--- +title: Data planning +type: Collection +page_id: data_planning +contributors: +description: This page includes all Learning Library content related to data planning +affiliations: +--- diff --git a/pages/data_reuse.md b/pages/data_reuse.md new file mode 100644 index 0000000..6a3f10c --- /dev/null +++ b/pages/data_reuse.md @@ -0,0 +1,8 @@ +--- +title: Data reuse +type: Collection +page_id: data_reuse +contributors: +description: This page includes all Learning Library content related to data reuse +affiliations: +--- diff --git a/pages/data_management-collection.md b/pages/data_sharing.md similarity index 75% rename from pages/data_management-collection.md rename to pages/data_sharing.md index cee5e08..e20b458 100644 --- a/pages/data_management-collection.md +++ b/pages/data_sharing.md @@ -1,9 +1,9 @@ --- -title: Data management +title: Data sharing type: Collection -page_id: data_management +page_id: data_sharing contributors: -description: This page includes all Learning Library content related to data management +description: This page includes all Learning Library content related to data sharing affiliations: --- diff --git a/pages/genomics.md b/pages/genomics.md new file mode 100644 index 0000000..4c5c585 --- /dev/null +++ b/pages/genomics.md @@ -0,0 +1,8 @@ +--- +title: Genomics +type: Collection +page_id: genomics +contributors: +description: This page includes all Learning Library content related to genomics +affiliations: +--- diff --git a/pages/metabolomics.md b/pages/metabolomics.md new file mode 100644 index 0000000..591dc1e --- /dev/null +++ b/pages/metabolomics.md @@ -0,0 +1,8 @@ +--- +title: Metabolomics +type: Collection +page_id: metabolomics +contributors: +description: This page includes all Learning Library content related to metabolomics +affiliations: +---