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conda-env-MutaRNA.yml
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name: MutaRNA-minimal
channels:
- conda-forge
- bioconda
- defaults
- r
- conda
dependencies:
- _libgcc_mutex=0.1=main
- _r-mutex=1.0.1=anacondar_1
- attrs=19.3.0=py_0
- backcall=0.1.0=py_0
- binutils_impl_linux-64=2.33.1=he1b5a44_7
- binutils_linux-64=2.33.1=h9595d00_15
- biopython=1.74=py37h516909a_0
- bleach=3.1.0=py_0
- boost-cpp=1.70.0=h8e57a91_2
- bwidget=1.9.14=0
- bzip2=1.0.8=h516909a_2
- ca-certificates=2019.11.28=hecc5488_0
- cairo=1.16.0=hfb77d84_1002
- certifi=2019.11.28=py37_0
- circos=0.69.8=0
- curl=7.65.3=hf8cf82a_0
- cycler=0.10.0=py_2
- dbus=1.13.6=he372182_0
- decorator=4.4.1=py_0
- defusedxml=0.6.0=py_0
- entrypoints=0.3=py37_1000
- expat=2.2.5=he1b5a44_1004
- fftw=3.3.8=nompi_h7f3a6c3_1110
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=2.001=hab24e00_0
- font-ttf-source-code-pro=2.030=hab24e00_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.13.1=h86ecdb6_1001
- fonts-conda-forge=1=0
- freetype=2.10.0=he983fc9_1
- fribidi=1.0.5=h516909a_1002
- gcc_impl_linux-64=7.3.0=habb00fd_2
- gcc_linux-64=7.3.0=h553295d_15
- gdk-pixbuf=2.36.12=haf2c3b9_1004
- gettext=0.19.8.1=hc5be6a0_1002
- gfortran_impl_linux-64=7.3.0=hdf63c60_2
- gfortran_linux-64=7.3.0=h553295d_15
- ghostscript=9.22=hf484d3e_1001
- giflib=5.1.7=h516909a_1
- glib=2.58.3=py37h6f030ca_1002
- gobject-introspection=1.58.2=py37h5503ade_1002
- graphite2=1.3.13=hf484d3e_1000
- graphviz=2.42.3=h0511662_0
- gsl=2.5=h294904e_1
- gst-plugins-base=1.14.5=h0935bb2_0
- gstreamer=1.14.5=h36ae1b5_0
- gxx_impl_linux-64=7.3.0=hdf63c60_2
- gxx_linux-64=7.3.0=h553295d_15
- harfbuzz=2.4.0=h9f30f68_3
- icu=64.2=he1b5a44_1
- imagemagick=7.0.9_7=pl526h5b29c3e_0
- importlib_metadata=1.2.0=py37_0
- intarna=3.1.3=h176a8bc_0
- ipykernel=5.1.3=py37h5ca1d4c_0
- ipython=7.10.1=py37h5ca1d4c_0
- ipython_genutils=0.2.0=py_1
- ipywidgets=7.5.1=py_0
- jbig=2.1=h14c3975_2001
- jedi=0.15.1=py37_0
- jinja2=2.10.3=py_0
- jpeg=9c=h14c3975_1001
- jsonschema=3.2.0=py37_0
- jupyter=1.0.0=py_2
- jupyter_client=5.3.3=py37_1
- jupyter_console=6.0.0=py_0
- jupyter_core=4.6.1=py37_0
- kiwisolver=1.1.0=py37hc9558a2_0
- krb5=1.16.4=h2fd8d38_0
- ld_impl_linux-64=2.33.1=h53a641e_7
- libblas=3.8.0=14_openblas
- libcblas=3.8.0=14_openblas
- libclang=9.0.0=default_hde54327_4
- libcroco=0.6.13=h8d621e5_0
- libcurl=7.65.3=hda55be3_0
- libedit=3.1.20170329=hf8c457e_1001
- libffi=3.2.1=he1b5a44_1006
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=9.2.0=hdf63c60_0
- libgd=2.2.5=h307a58e_1007
- libgfortran-ng=7.3.0=hdf63c60_2
- libiconv=1.15=h516909a_1005
- liblapack=3.8.0=14_openblas
- libllvm9=9.0.0=hc9558a2_3
- libopenblas=0.3.7=h5ec1e0e_5
- libpng=1.6.37=hed695b0_0
- librsvg=2.46.4=h33a7fed_0
- libsodium=1.0.17=h516909a_0
- libssh2=1.8.2=h22169c7_2
- libstdcxx-ng=9.2.0=hdf63c60_0
- libtiff=4.1.0=hc3755c2_1
- libtool=2.4.6=h14c3975_1002
- libuuid=2.32.1=h14c3975_1000
- libwebp=1.0.2=h576950b_1
- libxcb=1.13=h14c3975_1002
- libxkbcommon=0.9.1=hebb1f50_0
- libxml2=2.9.10=hee79883_0
- lz4-c=1.8.3=he1b5a44_1001
- make=4.2.1=h14c3975_2004
- markupsafe=1.1.1=py37h516909a_0
- matplotlib=3.1.2=py37_1
- matplotlib-base=3.1.2=py37h250f245_1
- mistune=0.8.4=py37h516909a_1000
- more-itertools=8.0.2=py_0
- nbconvert=5.6.1=py37_0
- nbformat=4.4.0=py_1
- ncurses=6.1=hf484d3e_1002
- notebook=6.0.1=py37_0
- nspr=4.24=he1b5a44_0
- nss=3.47=he751ad9_0
- numpy=1.17.3=py37h95a1406_0
- openjpeg=2.3.1=h981e76c_3
- openssl=1.1.1d=h516909a_0
- pandas=0.25.3=py37hb3f55d8_0
- pandoc=2.8.1=0
- pandocfilters=1.4.2=py_1
- pango=1.42.4=ha030887_1
- parso=0.5.1=py_0
- patsy=0.5.1=py_0
- pcre=8.43=he1b5a44_0
- pdf2svg=0.2.3=hfc5b85c_0
- perl=5.26.2=h516909a_1006
- perl-autoloader=5.74=pl526_2
- perl-carp=1.38=pl526_3
- perl-clone=0.42=pl526h516909a_0
- perl-config-general=2.63=pl526_0
- perl-digest-perl-md5=1.9=pl526_1
- perl-dynaloader=1.25=pl526_1
- perl-exporter=5.72=pl526_1
- perl-exporter-tiny=1.002001=pl526_0
- perl-extutils-makemaker=7.36=pl526_1
- perl-font-ttf=1.06=pl526_0
- perl-gd=2.71=pl526he860b03_0
- perl-io-string=1.08=pl526_3
- perl-list-moreutils=0.428=pl526_1
- perl-list-moreutils-xs=0.428=pl526_0
- perl-math-bezier=0.01=pl526_1
- perl-math-round=0.07=pl526_1
- perl-math-vecstat=0.08=pl526_1
- perl-module-implementation=0.09=pl526_2
- perl-module-runtime=0.016=pl526_1
- perl-number-format=1.75=pl526_3
- perl-params-validate=1.29=pl526h14c3975_1
- perl-pathtools=3.75=pl526h14c3975_1
- perl-readonly=2.05=pl526_0
- perl-regexp-common=2017060201=pl526_0
- perl-scalar-list-utils=1.52=pl526h516909a_0
- perl-set-intspan=1.19=pl526_1
- perl-statistics-basic=1.6611=pl526_2
- perl-svg=2.84=pl526_0
- perl-text-format=0.59=pl526_2
- perl-time-hires=1.9760=pl526h14c3975_1
- perl-try-tiny=0.30=pl526_1
- perl-xml-parser=2.44_01=pl526ha1d75be_1002
- perl-xsloader=0.24=pl526_0
- pexpect=4.7.0=py37_0
- pickleshare=0.7.5=py37_1000
- pip=19.3.1=py37_0
- pixman=0.38.0=h516909a_1003
- pkg-config=0.29.2=h14c3975_1005
- poppler=0.67.0=h14e79db_8
- poppler-data=0.4.9=1
- prometheus_client=0.7.1=py_0
- prompt_toolkit=2.0.10=py_0
- pthread-stubs=0.4=h14c3975_1001
- ptyprocess=0.6.0=py_1001
- pygments=2.5.2=py_0
- pyparsing=2.4.5=py_0
- pyqt=5.12.3=py37hcca6a23_1
- pyrsistent=0.15.6=py37h516909a_0
- python=3.7.3=h357f687_2
- python-dateutil=2.8.1=py_0
- pytz=2019.3=py_0
- pyzmq=18.1.1=py37h1768529_0
- qt=5.12.5=hd8c4c69_1
- qtconsole=4.6.0=py_0
- r=3.6=r36_1003
- r-base=3.6.2=h3a67422_0
- r-boot=1.3_23=r36h6115d3f_2
- r-class=7.3_15=r36hcdcec82_1001
- r-cluster=2.1.0=r36h9bbef5b_2
- r-codetools=0.2_16=r36h6115d3f_1001
- r-foreign=0.8_72=r36hcdcec82_0
- r-getopt=1.20.3=r36_1
- r-kernsmooth=2.23_15=r36h9bbef5b_1004
- r-lattice=0.20_38=r36hcdcec82_1002
- r-mass=7.3_51.4=r36hcdcec82_1
- r-matrix=1.2_17=r36hcdcec82_1
- r-mgcv=1.8_29=r36hcdcec82_0
- r-nlme=3.1_141=r36h9bbef5b_1
- r-nnet=7.3_12=r36hcdcec82_1003
- r-optparse=1.6.4=r36h6115d3f_0
- r-rcolorbrewer=1.1_2=r36h6115d3f_1002
- r-recommended=3.6=r36_1003
- r-rpart=4.1_15=r36hcdcec82_1
- r-spatial=7.3_11=r36hcdcec82_1003
- r-survival=2.44_1.1=r36hcdcec82_1
- readline=8.0=hf8c457e_0
- remurna=1.0=0
- rnasnp=1.2=h470a237_4
- scipy=1.3.2=py37h921218d_0
- seaborn=0.9.0=py_2
- sed=4.7=h1bed415_1000
- send2trash=1.5.0=py_0
- setuptools=42.0.2=py37_0
- six=1.13.0=py37_0
- sqlite=3.30.1=hcee41ef_0
- statsmodels=0.10.2=py37hc1659b7_0
- terminado=0.8.3=py37_0
- testpath=0.4.4=py_0
- tk=8.6.10=hed695b0_0
- tktable=2.10=h555a92e_3
- tornado=6.0.3=py37h516909a_0
- traitlets=4.3.3=py37_0
- viennarna=2.4.14=py37h8b12597_0
- wcwidth=0.1.7=py_1
- webencodings=0.5.1=py_1
- wheel=0.33.6=py37_0
- widgetsnbextension=3.5.1=py37_0
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.9=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxpm=3.5.13=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxt=1.1.5=h516909a_1003
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.4=h14c3975_1001
- zeromq=4.3.2=he1b5a44_2
- zipp=0.6.0=py_0
- zlib=1.2.11=h516909a_1006
- zstd=1.4.4=h3b9ef0a_1
- pip:
- pyqt5-sip==4.19.18
- pyqtwebengine==5.12.1
prefix: /home/milad/miniconda3/envs/MutaRNA-minimal