From 8e319d972ac849cf004b2cb0d50c17691dbda0be Mon Sep 17 00:00:00 2001
From: asgray <antgray89@gmail.com>
Date: Mon, 23 Sep 2024 15:21:02 -0700
Subject: [PATCH] RepeatModeler NINJA config fix

---
 Dockerfile      | 2 +-
 dfam-tetools.sh | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index e898e3f..681d48d 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -188,7 +188,7 @@ RUN cd /opt \
     && perl configure \
          -cdhit_dir=/opt/cd-hit -genometools_dir=/opt/genometools/bin \
          -ltr_retriever_dir=/opt/LTR_retriever -mafft_dir=/opt/mafft/bin \
-         -ninja_dir=/opt/NINJA/NINJA -recon_dir=/opt/RECON/bin \
+         -ninja_dir=/opt/NINJA -recon_dir=/opt/RECON/bin \
          -repeatmasker_dir=/opt/RepeatMasker \
          -rmblast_dir=/opt/rmblast/bin -rscout_dir=/opt/RepeatScout \
          -trf_dir=/opt \
diff --git a/dfam-tetools.sh b/dfam-tetools.sh
index 813645a..8a360c5 100755
--- a/dfam-tetools.sh
+++ b/dfam-tetools.sh
@@ -31,7 +31,7 @@ programs are available, singularity is preferred."
 
 ## Parse command-line arguments ##
 
-container="dfam/tetools:1.89.1"
+container="dfam/tetools:1.89.2"
 use_docker=0
 use_singularity=0
 use_lib=0