From d5997bde3d6b4ccf8a360d4863846487318d9795 Mon Sep 17 00:00:00 2001
From: Marcel Zwiers <m.zwiers@donders.ru.nl>
Date: Tue, 10 Dec 2024 13:32:48 +0100
Subject: [PATCH] Make sure we do not try to add data samples to the provenance
 store, i.e. when using `bidsmapper -s` (GitHub issue #252)

---
 bidscoin/bidseditor.py | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/bidscoin/bidseditor.py b/bidscoin/bidseditor.py
index af833e9f..b80e9d3d 100755
--- a/bidscoin/bidseditor.py
+++ b/bidscoin/bidseditor.py
@@ -147,6 +147,9 @@ def __init__(self, bidsfolder: Path, input_bidsmap: BidsMap, template_bidsmap: B
                 input_bidsmap = copy.deepcopy(template_bidsmap)
                 input_bidsmap.delete_runs()
 
+        # Make sure we do not try to add data samples to the provenance store (i.e. when using bidsmapper -s)
+        input_bidsmap.store = {}
+
         # Keep track of the EditWindow status
         self.editwindow_opened: Union[str,None] = None
         """The provenance of the run-item that is opened in the EditWindow"""