Jobs

The main goal of the EVA pipeline is to store variants read from VCF files, calculate population statistics and annotate them using Ensembl's Variant Effect Predictor.

In order to do so, the following jobs are available:

• Initializing the database
• Processing a genotyped VCF
• Processing an aggregated VCF
• Re-annotating variants (work in progress)
• Re-calculating statistics (work in progress)

Please note this section is a work in progress and more details about the structure of each job will be added in the future.