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PROSEQ2 concurrency optimization #2

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eternal-flame-AD opened this issue Aug 17, 2024 · 0 comments
Open

PROSEQ2 concurrency optimization #2

eternal-flame-AD opened this issue Aug 17, 2024 · 0 comments

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@eternal-flame-AD
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dREG-nf/modules/local/proseq2/main.nf

Line 1 in 06a1d11

process PROSEQ2 {

PROSEQ2 is not very good at high concurrency, I suggest defaulting to only giving at most 4 CPUs to each sample and let nextflow parallelize across samples instead.
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