diff --git a/dlg-graphs-final/casda_download_pipeline_2.graph b/dlg-graphs-final/casda_download_pipeline_2.graph index b383179..796ac71 100644 --- a/dlg-graphs-final/casda_download_pipeline_2.graph +++ b/dlg-graphs-final/casda_download_pipeline_2.graph @@ -19,7 +19,7 @@ "lastModifiedName": "", "lastModifiedEmail": "", "lastModifiedDatetime": 0, - "numLGNodes": 25 + "numLGNodes": 22 }, "nodeDataArray": [ { @@ -31,8 +31,8 @@ "key": -7, "name": "CimagerParset", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": 1270.3664070126133, - "y": 290.5770648188332, + "x": 1220.538293880054, + "y": 285.56587817273146, "radius": 25, "collapsed": false, "subject": null, @@ -447,7 +447,7 @@ "key": -2, "name": "test_catalogue.csv", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": -59.67471385564557, + "x": -23.393099730072475, "y": 480.64518131757404, "radius": 25, "collapsed": false, @@ -607,8 +607,8 @@ "key": -4, "name": "read_and_process_csv", "description": "An application that wraps a simple python function. The inputs of the application are treated as the arguments of the function. Conversely, the output of the function is treated as the output of the application. If the application has more than one output, the result of calling the function is treated as an iterable, with each individual object being written to its corresponding output.", - "x": 191.93267564953362, - "y": 482.5186227419608, + "x": 208.424318433885, + "y": 479.22029418509055, "radius": 25, "collapsed": false, "subject": null, @@ -991,7 +991,7 @@ "description": "A default Scatter construct for the GenericScatterApp component.", "x": 1146.735248498255, "y": 483.9878717429649, - "radius": 489.84671625890826, + "radius": 509.32816021662626, "collapsed": false, "subject": null, "expanded": true, @@ -1534,8 +1534,8 @@ "key": -11, "name": "imcontsub", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": 1267.7220682224229, - "y": 479.6917861745503, + "x": 1223.4965184645137, + "y": 483.52379987429975, "radius": 25, "collapsed": false, "subject": null, @@ -1950,8 +1950,8 @@ "key": -15, "name": "linmosParset", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": 1251.4451213091786, - "y": 709.6022105303791, + "x": 1226.9722102821472, + "y": 712.5507396480507, "radius": 25, "collapsed": false, "subject": null, @@ -3927,932 +3927,6 @@ "outputApplicationKey": null, "outputApplicationDescription": "" }, - { - "category": "Docker", - "categoryType": "Application", - "isGroup": false, - "color": "#0059a5", - "drawOrderHint": 0, - "key": -1, - "name": "imager", - "description": "A component wrapping docker based applications.", - "x": 2000.9534680265187, - "y": 731.7357972094552, - "radius": 25, - "collapsed": false, - "subject": null, - "expanded": true, - "repositoryUrl": "https://github.com/ICRAR/daliuge", - "commitHash": "04777bc", - "paletteDownloadUrl": "https://raw.githubusercontent.com/ICRAR/EAGLE_test_repo/master/daliuge/daliuge-master-template.palette", - "dataHash": "173db865039321d89a824224eeec81b9f40e284a796e687741a5a18177d831df", - "fields": [ - { - "name": "image", - "value": "csirocass/yandasoft:dev-openmpi2", - "defaultValue": "", - "description": "The name of the docker image to be used for this application", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "ed7c9fce-2689-40c9-9011-9b103773bbf9", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "docker_tag", - "value": "1.0", - "defaultValue": "1.0", - "description": "The tag of the docker image to be used for this application", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "be8eadba-c61e-4f26-97b5-61fc1196b843", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "docker_digest", - "value": "", - "defaultValue": "", - "description": "The hexadecimal hash (long version) of the docker image to be used for this application", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "6acdbe22-668f-4757-b73d-17a36e00c996", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "command", - "value": "cd $DLG_ROOT/testdata && mpirun -np 4 --allow-run-as-root imager", - "defaultValue": "", - "description": "The command line to run within the docker instance. The specified command will be executed in a bash shell. That means that images will need a bash shell.", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "ca1474b7-2063-40e3-bc8b-a6238dac400d", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "input_redirection", - "value": "", - "defaultValue": "", - "description": "The command line argument that specifies the input into this application", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "5b20daa9-aa1b-4f57-afd3-bb61f3d34e2b", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "output_redirection", - "value": "", - "defaultValue": "", - "description": "The command line argument that specifies the output from this application", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "a13e147a-2a5e-4709-94d2-2a244b0da21c", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "command_line_arguments", - "value": "", - "defaultValue": "", - "description": "Additional command line arguments to be added to the command line to be executed", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "7a16b819-970f-4523-8afa-15b6feb4b447", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "entrypoint", - "value": "", - "defaultValue": "", - "description": "", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "06602464-ca53-431a-ab8e-cc4b902f21bf", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "config", - "value": "", - "defaultValue": "", - "description": "", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "4746a17f-1e74-425b-a4ff-c8f3dc940f8e", - "parameterType": "ApplicationArgument", - "usage": "InputPort" - }, - { - "name": "paramValueSeparator", - "value": " ", - "defaultValue": " ", - "description": "Separator character(s) between parameters and their respective values on the command line", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "8b21445b-ebba-4884-a06c-ffad2ce8e65a", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "argumentPrefix", - "value": "--", - "defaultValue": "--", - "description": "Prefix to each keyed argument on the command line", - "readonly": true, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - 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"readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "a32b244a-1387-4920-81ae-37828699b781", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "removeContainer", - "value": 1, - "defaultValue": "0", - "description": "", - "readonly": false, - "type": "Integer", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "2c569724-1deb-46c6-91c2-e7edc0cab1a0", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "additionalBindings", - "value": "", - "defaultValue": "", - "description": "Any additional bindings that should be passed through to the image", - "readonly": false, - "type": "String", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "171d32e0-0cda-4c74-b5be-9700fe59ebea", - "parameterType": "ComponentParameter", - "usage": "NoPort" - }, - { - "name": "c", - "value": "", - "defaultValue": "", - "description": "", - "readonly": false, - "type": "Object", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "c4fccc08-38ec-4b95-a126-1a2f54d0c5a4", - "parameterType": "ApplicationArgument", - "usage": "InputPort" - }, - { - "name": "linmos_image", - "value": "", - "defaultValue": "", - "description": "", - "readonly": false, - "type": "Object", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "ea2d63da-182f-4853-8591-f9f2e6e7e9b1", - "parameterType": "ComponentParameter", - "usage": "OutputPort" - }, - { - "name": "event", - "value": "", - "defaultValue": "", - "description": "", - "readonly": false, - "type": "Object.event", - "precious": false, - "options": [], - "positional": false, - "keyAttribute": false, - "encoding": "pickle", - "id": "7732d92f-ef9d-46be-997d-e3b72bc44763", - "parameterType": "ComponentParameter", - "usage": "InputOutput" - } - ], - "inputAppFields": [], - "outputAppFields": [], - "inputApplicationName": "", - "inputApplicationType": "None", - "inputApplicationKey": null, - "inputApplicationDescription": "", - "outputApplicationName": "", - "outputApplicationType": "None", - "outputApplicationKey": null, - "outputApplicationDescription": "" - }, { "category": "PythonApp", "categoryType": "Application", @@ -4863,7 +3937,7 @@ "name": "CopyApp (imager)", "description": "A simple APP that copies its inputs into its outputs. All inputs are copied into all outputs in the order they were declared in the graph. If an input is a container (e.g. a directory) it copies the content recursively.", "x": 1426.1296836324968, - "y": 293.7700304020847, + "y": 286.6949927239711, "radius": 25, "collapsed": false, "subject": null, @@ -5085,8 +4159,8 @@ "key": -14, "name": "dummy", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": 1538.1082077457716, - "y": 294.4651200454516, + "x": 1549.034535620521, + "y": 289.0019561080768, "radius": 25, "collapsed": false, "subject": null, @@ -5262,8 +4336,8 @@ "key": -20, "name": "CopyApp (imcontsub)", "description": "A simple APP that copies its inputs into its outputs. All inputs are copied into all outputs in the order they were declared in the graph. If an input is a container (e.g. a directory) it copies the content recursively.", - "x": 1421.883243728492, - "y": 481.3867236515136, + "x": 1420.0621890827003, + "y": 485.0288329430968, "radius": 25, "collapsed": false, "subject": null, @@ -5485,8 +4559,8 @@ "key": -22, "name": "dummy", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": 1540.2165938243809, - "y": 481.05728800236284, + "x": 1552.0534490220266, + "y": 487.43097926263346, "radius": 25, "collapsed": false, "subject": null, @@ -5662,8 +4736,8 @@ "key": -23, "name": "event", "description": "In-memory storage of intermediate data products", - "x": 1424.7864009607374, - "y": 386.42541446471637, + "x": 1425.6969282836333, + "y": 380.05172320444575, "radius": 25, "collapsed": true, "subject": null, @@ -5823,8 +4897,8 @@ "key": -24, "name": "CopyApp (linmos)", "description": "A simple APP that copies its inputs into its outputs. All inputs are copied into all outputs in the order they were declared in the graph. If an input is a container (e.g. a directory) it copies the content recursively.", - "x": 1409.9344887898005, - "y": 709.6420427465483, + "x": 1411.8601338881183, + "y": 715.9111435542927, "radius": 25, "collapsed": false, "subject": null, @@ -6046,8 +5120,8 @@ "key": -25, "name": "dummy", "description": "A standard file on a filesystem mounted to the deployment machine", - "x": 1519.6848028847612, - "y": 704.8791001845804, + "x": 1539.7307429727505, + "y": 711.9541378626942, "radius": 25, "collapsed": false, "subject": null,