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DESCRIPTION
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Package: recount3
Title: Explore and download data from the recount3 project
Version: 1.17.0
Date: 2023-05-06
Authors@R:
c(
person("Leonardo", "Collado-Torres", role = c("aut", "cre"),
email = "[email protected]", comment = c(ORCID = "0000-0003-2140-308X"))
)
Description: The recount3 package enables access to a large amount of uniformly
processed RNA-seq data from human and mouse. You can download
RangedSummarizedExperiment objects at the gene, exon or exon-exon junctions
level with sample metadata and QC statistics. In addition we provide access
to sample coverage BigWig files.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
URL: https://github.com/LieberInstitute/recount3
BugReports: https://github.com/LieberInstitute/recount3/issues
biocViews: Coverage, DifferentialExpression, GeneExpression, RNASeq, Sequencing,
Software, DataImport
Suggests:
BiocStyle,
covr,
knitcitations,
knitr,
RefManageR,
rmarkdown,
testthat,
pryr,
interactiveDisplayBase,
recount
VignetteBuilder: knitr
Depends:
SummarizedExperiment
Imports:
BiocFileCache,
methods,
rtracklayer,
S4Vectors,
utils,
httr,
data.table,
R.utils,
Matrix,
GenomicRanges,
sessioninfo,
tools