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SpecimenSearch.cfm
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<cfinclude template="/includes/_header.cfm">
<cfhtmlhead text='<script src="http://maps.googleapis.com/maps/api/js?client=gme-museumofvertebrate1&sensor=false&libraries=places,geometry" type="text/javascript"></script>'>
<script src="/includes/jquery/jquery-autocomplete/jquery.autocomplete.pack.js" language="javascript" type="text/javascript"></script>
<script src="/includes/jquery.multiselect.min.js"></script>
<link rel="stylesheet" href="/includes/jquery.multiselect.css" />
<cfset title="Specimen Search">
<cfset metaDesc="Search for museum specimens and observations by taxonomy, identifications, specimen attributes, and usage history.">
<cfoutput>
<cfquery name="getCount" datasource="user_login" username="#session.dbuser#" password="#decrypt(session.epw,session.sessionKey)#" cachedwithin="#createtimespan(0,0,60,0)#">
select count(collection_object_id) as cnt from cataloged_item
</cfquery>
<cfquery name="ctmedia_type" datasource="cf_dbuser" cachedwithin="#createtimespan(0,0,60,0)#">
select media_type from ctmedia_type order by media_type
</cfquery>
<cfquery name="ctcataloged_item_type" datasource="cf_dbuser" cachedwithin="#createtimespan(0,0,60,0)#">
select cataloged_item_type from ctcataloged_item_type order by cataloged_item_type
</cfquery>
<cfquery name="hasCanned" datasource="user_login" username="#session.dbuser#" password="#decrypt(session.epw,session.sessionKey)#">
select SEARCH_NAME,URL
from cf_canned_search,cf_users
where cf_users.user_id=cf_canned_search.user_id
and username='#session.username#'
and URL like '%SpecimenResults.cfm%'
order by search_name
</cfquery>
<style>
/* for some strange reason this won't work from the .css so keep it here...*/
.ui-helper-reset a, ui-helper-reset a:visited {color:blue; !important;}
.ui-helper-reset a:hover {color:red; !important;}
</style>
<table cellpadding="0" cellspacing="0">
<tr>
<td>
Access to #numberformat(getCount.cnt,",")# records
</td>
<cfif hasCanned.recordcount gt 0>
<td style="padding-left:2em;padding-right:2em;">
Saved Searches: <select name="goCanned" id="goCanned" size="1" onchange="document.location=this.value;">
<option value=""></option>
<option value="saveSearch.cfm?action=manage">[ Manage ]</option>
<cfloop query="hasCanned">
<option value="#url#">#SEARCH_NAME#</option><br />
</cfloop>
</select>
</td>
</cfif>
<td style="padding-left:2em;padding-right:2em;">
<span style="color:red;">
<cfif action is "dispCollObj">
<p>You are searching for items to add to a loan.</p>
<cfelseif action is "encumber">
<p>You are searching for items to encumber.</p>
<cfelseif action is "collEvent">
<p>You are searching for items to change collecting event.</p>
<cfelseif action is "identification">
<p>You are searching for items to reidentify.</p>
<cfelseif action is "addAccn">
<p>You are searching for items to reaccession.</p>
</cfif>
</span>
</td>
</tr>
</table>
<form method="post" action="SpecimenResults.cfm" name="SpecData" id="SpecData" onSubmit="getFormValues();">
<table>
<tr>
<td valign="top">
<input type="submit" value="Search" class="schBtn">
</td>
<td valign="top">
<input type="button" name="Reset" value="Clear Form" class="clrBtn" onclick="resetSSForm();">
</td>
<td valign="top">
<input type="button" name="Previous" value="Use Last Values" class="lnkBtn" onclick="setPrevSearch()">
</td>
<td align="right" valign="top">
See results as:
</td>
<td valign="top">
<select name="tgtForm" id="tgtForm" size="1" onChange="changeTarget(this.id,this.value);">
<option value="SpecimenResults.cfm">Specimen Records</option>
<option value="SpecimenResultsHTML.cfm">HTML Specimen Records</option>
<option value="/bnhmMaps/bnhmMapData.cfm">BerkeleyMapper Map</option>
<option value="/bnhmMaps/kml.cfm?action=newReq">KML</option>
<option value="SpecimenResultsSummary.cfm">Specimen Summary</option>
<option value="SpecimenGraph.cfm">Graph</option>
</select>
</td>
<td align="left">
<div id="groupByDiv" style="display:none;border:1px solid green;padding:.5em;">
<font size="-1"><em><strong>Group by:</strong></em></font><br>
<select name="groupBy" id="groupBy" multiple size="4">
<option value="kingdom">Kingdom</option>
<option value="phylum">Phylum</option>
<option value="phylclass">Class</option>
<option value="phylorder">Order</option>
<option value="family">Family</option>
<option value="subfamily">Subfamily</option>
<option value="tribe">Tribe</option>
<option value="subtribe">Subtribe</option>
<option value="genus">Genus</option>
<option value="scientific_name">Scientific Name</option>
<option value="formatted_scientific_name">Formatted Scientific Name</option>
<option value="identifiedby">IdentifiedBy</option>
<option value="continent_ocean">Continent</option>
<option value="country">Country</option>
<option value="state_prov">State</option>
<option value="county">County</option>
<option value="quad">Map Name</option>
<option value="feature">Feature</option>
<option value="island">Island</option>
<option value="island_group">Island Group</option>
<option value="sea">Sea</option>
<option value="spec_locality">Specific Locality</option>
<option value="year">Year</option>
<option value="individualcount">IndividualCount</option>
</select>
</div>
<div id="kmlDiv" style="display:none;border:1px solid green;padding:.5em;">
<font size="-1"><em><strong>KML Options:</strong></em></font><br>
<label for="next">Color By</label>
<select name="next" id="next" >
<option value="colorByCollection">Collection</option>
<option value="colorBySpecies">Species</option>
</select>
<label for="method">Method</label>
<select name="method" id="method">
<option value="download">Download</option>
<option value="link">Download Linkfile</option>
<option value="gmap">Google Maps</option>
</select>
<label for="includeTimeSpan">include Time?</label>
<select name="includeTimeSpan" id="includeTimeSpan" >
<option value="0">no</option>
<option value="1">yes</option>
</select>
<label for="showErrors">Show error radii?</label>
<select name="showErrors" id="showErrors" >
<option value="0">no</option>
<option value="1">yes</option>
</select>
</div>
</td>
</tr>
</table>
<div>
<span class="helpLink" id="_cataloged_item_type">Type</span>:<select name="cataloged_item_type" id="cataloged_item_type" size="1">
<option value="">any</option>
<cfloop query="ctcataloged_item_type">
<option value="#ctcataloged_item_type.cataloged_item_type#">#ctcataloged_item_type.cataloged_item_type#</option>
</cfloop>
</select>
<span class="helpLink" id="_is_tissue">Require Tissues?</span><input type="checkbox" name="is_tissue" id="is_tissue" value="1">
</div>
<input type="hidden" name="action" value="#action#">
<div class="secDiv">
<cfquery name="ctInst" datasource="user_login" username="#session.dbuser#" password="#decrypt(session.epw,session.sessionKey)#" cachedwithin="#createtimespan(0,0,60,0)#">
SELECT
collection.institution,
collection.collection,
collection.collection_id,
collection.guid_prefix
FROM
collection,
cf_collection
where
collection.collection_id=cf_collection.collection_id and
PUBLIC_PORTAL_FG=1
order by collection.collection
</cfquery>
<cfif isdefined("collection_id") and len(collection_id) gt 0>
<cfset thisCollId = collection_id>
<cfelse>
<cfset thisCollId = "">
</cfif>
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Identifiers</span>
<span class="secControl" id="c_identifiers" onclick="showHide('identifiers',1)">Show More Options</span>
<span class="secControl" id="c_identifiers_cust">Customize</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="collection">Collection</span>:
</td>
<td class="srch">
<cfquery name="cfi" dbtype="query">
select institution from ctInst group by institution order by institution
</cfquery>
<select name="collection_id" id="collection_id" size="3" multiple="multiple">
<cfloop query="cfi">
<cfquery name="ic" dbtype="query">
select collection, collection_id,guid_prefix FROM ctInst where institution='#cfi.institution#' order by collection
</cfquery>
<optgroup label="#institution#">
<cfloop query="ic">
<option <cfif thisCollId is ic.collection_id>selected="selected" </cfif>value="#ic.collection_id#">#ic.collection# (#ic.guid_prefix#)</option>
</cfloop>
</optgroup>
</cfloop>
</select>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="cat_num">Catalog Number:</span>
</td>
<td class="srch">
<cfif ListContains(session.searchBy, 'bigsearchbox') gt 0>
<textarea name="listcatnum" id="listcatnum" rows="6" cols="40" class="largetextarea"></textarea>
<cfelse>
<input type="text" name="listcatnum" id="listcatnum" size="50" value="">
</cfif>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="guid">GUID:</span>
</td>
<td class="srch">
<cfif ListContains(session.searchBy, 'bigsearchbox') gt 0>
<textarea name="guid" id="guid" rows="6" cols="40" class="largetextarea"></textarea>
<cfelse>
<input type="text" name="guid" id="guid" size="50" value="">
</cfif>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="anyid">Any Identifier:</span>
</td>
<td class="srch">
<input type="text" name="anyid" id="anyid" size="50" value="">
</td>
</tr>
<cfif isdefined("session.CustomOtherIdentifier") and len(session.CustomOtherIdentifier) gt 0>
<tr>
<td class="lbl">
<span class="helpLink" id="custom_identifier">#replace(session.CustomOtherIdentifier," "," ","all")#:</span>
</td>
<td class="srch">
<cfif isdefined("session.CustomOidOper")>
<cfset thisSelected=session.CustomOidOper>
<cfelse>
<cfset thisSelected="IS">
</cfif>
<label for="CustomOidOper">Display Value</label>
<select name="CustomOidOper" id="CustomOidOper" size="1" onchange="setSessionCustomID(this.value);">
<option value="IS" <cfif thisSelected is "IS"> selected="selected"</cfif>>is</option>
<option value="" <cfif thisSelected is ""> selected="selected"</cfif>>contains</option>
<option value="LIST"<cfif thisSelected is "LIST"> selected="selected"</cfif>>in list</option>
<option value="BETWEEN"<cfif thisSelected is "BETWEEN"> selected="selected"</cfif>>in range</option>
</select> <input type="text" name="CustomIdentifierValue" id="CustomIdentifierValue" size="50">
</td>
</tr>
<tr>
<td class="lbl">
<cfif isdefined("session.fancyCOID") and session.fancyCOID is 1>
</td>
<td class="srch">
<table cellpadding="0" cellspacing="0">
<tr>
<td>
<label for="custom_id_prefix">OR: Prefix</label>
<input type="text" name="custom_id_prefix" id="custom_id_prefix" size="12">
</td>
<td>
<label for="custom_id_number">Number</label>
<input type="text" name="custom_id_number" id="custom_id_number" size="24">
</td>
<td>
<label for="custom_id_suffix">Suffix</label>
<input type="text" name="custom_id_suffix" id="custom_id_suffix" size="12">
</td>
</tr>
</table>
</td>
</cfif>
</tr>
</cfif>
</table>
<div id="e_identifiers"></div>
</div>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Identification and Taxonomy</span>
<span class="secControl" id="c_taxonomy" onclick="showHide('taxonomy',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="_scientific_name">Identification</span>
</td>
<td class="srch">
<table style="border:1px solid green;">
<tr>
<td>
<input type="text" name="scientific_name" id="scientific_name" size="50" placeholder="Identification (scientific name)">
</td>
</tr>
<tr>
<td>
<table width="100%">
<tr>
<td width="50%">
<label for="scientific_name_scope">Include previous IDs?</label>
<select name="scientific_name_scope" id="scientific_name_scope">
<option value="currentID">Current ID only</option>
<option value="allID">Include all IDs</option>
</select>
</td>
<td>
<label id="_scientific_name_match_type" class="helpLink" style="text-align:left;" for="scientific_name_match_type">Match Type</label>
<select name="scientific_name_match_type" id="scientific_name_match_type">
<option value="startswith">starts with</option>
<option value="exact">is (case insensitive)</option>
<option value="notcontains">does not contain</option>
<option value="inlist">comma-list</option>
<option value="inlist_substring">comma-list (substring)</option>
</select>
</td>
</tr>
</table>
</td>
</tr>
</table>
</td>
</tr>
</table>
<div id="e_taxonomy"></div>
</div>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Locality</span>
<span class="secControl" id="c_locality" onclick="showHide('locality',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="_any_geog">Any Geographic Element:</span>
</td>
<td class="srch">
<input type="text" name="any_geog" id="any_geog" size="50">
<span class="secControl" style="font-size:.9em;" id="c_spatial_query" onclick="showHide('spatial_query',1)">Select on Google Map</span>
</td>
</tr>
<tr>
<td colspan="2">
<div id="e_spatial_query"></div>
</td>
</tr>
</table>
<div id="e_locality"></div>
</div>
<cfquery name="ctcollector_role" datasource="user_login" username="#session.dbuser#" password="#decrypt(session.epw,session.sessionKey)#" cachedwithin="#createtimespan(0,0,60,0)#">
select collector_role from ctcollector_role order by collector_role
</cfquery>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Date/Collector</span>
<span class="secControl" id="c_collevent" onclick="showHide('collevent',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink infoLink" id="collector">Help</span>
<select name="coll_role" id="coll_role" size="1">
<option value="" selected="selected">Agent Role</option>
<cfloop query="ctcollector_role">
<option value="#ctcollector_role.collector_role#">#ctcollector_role.collector_role#</option>
</cfloop>
</select>
<span class="infoLink" onclick="getCtDoc('ctcollector_role',SpecData.coll_role.value);">Define</span>
</td>
<td class="srch">
<input type="text" name="coll" id="coll" size="50">
</td>
</tr>
</table>
<div id="e_collevent"></div>
</div>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Biological Individual</span>
<span class="secControl" id="c_biolindiv" onclick="showHide('biolindiv',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="part_name">Part Name:</span>
</td>
<td class="srch">
<input type="text" name="partname" id="partname">
<span class="infoLink" onclick="getCtDoc('ctspecimen_part_name',SpecData.partname.value);">Define</span>
<span class="infoLink" onclick="var e=document.getElementById('partname');e.value='='+e.value;">Add = for exact match</span>
</td>
</tr>
</table>
<div id="e_biolindiv"></div>
</div>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Usage</span>
<span class="secControl" id="c_usage" onclick="showHide('usage',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="_type_status">Basis of Citation:</span>
</td>
<td class="srch">
<cfquery name="ctTypeStatus" datasource="user_login" username="#session.dbuser#" password="#decrypt(session.epw,session.sessionKey)#" cachedwithin="#createtimespan(0,0,60,0)#">
select type_status from ctcitation_type_status
</cfquery>
<select name="type_status" id="type_status" size="1">
<option value=""></option>
<option value="any">Any</option>
<option value="type">Any TYPE</option>
<cfloop query="ctTypeStatus">
<option value="#ctTypeStatus.type_status#">#ctTypeStatus.type_status#</option>
</cfloop>
</select>
<span class="infoLink" onclick="getCtDoc('ctcitation_type_status', SpecData.type_status.value);">Define</span>
</td>
</tr>
</table>
<div id="e_usage"></div>
</div>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Media</span>
<span class="secControl" id="c_media" onclick="showHide('media',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="_media_type">Media Type:</span>
</td>
<td class="srch">
<select name="media_type" id="media_type" size="1">
<option value=""></option>
<option value="any">Any</option>
<cfloop query="ctmedia_type">
<option value="#ctmedia_type.media_type#">#ctmedia_type.media_type#</option>
</cfloop>
</select>
<span class="infoLink" onclick="getCtDoc('ctmedia_type', SpecData.media_type.value);">Define</span>
</td>
</tr>
</table>
<div id="e_media"></div>
</div>
<cfquery name="ctid_references" datasource="user_login" username="#session.dbuser#" password="#decrypt(session.epw,session.sessionKey)#" cachedwithin="#createtimespan(0,0,60,0)#">
select id_references from ctid_references where id_references != 'self' order by id_references
</cfquery>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Relationships</span>
<span class="secControl" id="c_relationships" onclick="showHide('relationships',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="id_references">Relationship:</span>
</td>
<td class="srch">
<select name="id_references" id="id_references" size="1">
<option value=""></option>
<cfloop query="ctid_references">
<option value="#ctid_references.id_references#">#ctid_references.id_references#</option>
</cfloop>
</select>
</td>
</tr>
</table>
<div id="e_relationships"></div>
</div>
<cfif listcontainsnocase(session.roles,"coldfusion_user")>
<div class="secDiv">
<table class="ssrch">
<tr>
<td colspan="2" class="secHead">
<span class="secLabel">Curatorial</span>
<span class="secControl" id="c_curatorial" onclick="showHide('curatorial',1)">Show More Options</span>
</td>
</tr>
<tr>
<td class="lbl">
<span class="helpLink" id="srch_barcode">Part Barcode:</span>
</td>
<td class="srch">
<input type="text" name="barcode" id="barcode" size="50">
</td>
</tr>
</table>
<div id="e_curatorial"></div>
</div>
</cfif>
<table>
<tr>
<td valign="top">
<input type="submit" value="Search" class="schBtn">
</td>
<td valign="top">
<input type="button" name="Reset" value="Clear Form" class="clrBtn" onclick="resetSSForm();">
</td>
<td valign="top">
<input type="button" name="Previous" value="Use Last Values" class="lnkBtn" onclick="setPrevSearch()">
</td>
<!----
<td valign="top" align="right">
<b>See results as:</b>
</td>
<td align="left" colspan="2" valign="top">
<select name="tgtForm" id="tgtForm" size="1" onChange="changeTarget(this.id,this.value);">
<option value="">Specimen Records</option>
<option value="SpecimenResultsHTML.cfm">HTML Specimen Records</option>
<option value="/bnhmMaps/bnhmMapData.cfm">BerkeleyMapper Map</option>
<option value="/bnhmMaps/kml.cfm?action=newReq">KML</option>
<option value="SpecimenResultsSummary.cfm">Specimen Summary</option>
<option value="SpecimenGraph.cfm">Graph</option>
<cfif isdefined("session.username") AND (#session.username# is "link" OR #session.username# is "dusty")>
<option value="/CustomPages/Link.cfm">Link's Form</option>
</cfif>
<cfif isdefined("session.username") AND (#session.username# is "cindy" OR #session.username# is "dusty")>
<option value="/CustomPages/CindyBats.cfm">Cindy's Form</option>
</cfif>
</select>
</td>
<td align="left">
<div id="groupByDiv" style="display:none;border:1px solid green;padding:.5em;">
<font size="-1"><em><strong>Group by:</strong></em></font><br>
<select name="groupBy" id="groupBy" multiple size="4" onchange="changeGrp(this.id)">
<option value="kingdom">Kingdom</option>
<option value="phylum">Phylum</option>
<option value="phylclass">Class</option>
<option value="phylorder">Order</option>
<option value="family">Family</option>
<option value="subfamily">Subfamily</option>
<option value="tribe">Tribe</option>
<option value="subtribe">Subtribe</option>
<option value="genus">Genus</option>
<option value="scientific_name">Scientific Name</option>
<option value="formatted_scientific_name">Formatted Scientific Name</option>
<option value="identifiedby">IdentifiedBy</option>
<option value="continent_ocean">Continent</option>
<option value="country">Country</option>
<option value="state_prov">State</option>
<option value="county">County</option>
<option value="quad">Map Name</option>
<option value="feature">Feature</option>
<option value="island">Island</option>
<option value="island_group">Island Group</option>
<option value="sea">Sea</option>
<option value="spec_locality">Specific Locality</option>
<option value="year">Year</option>
<option value="individualcount">individualcount</option>
</select>
</div>
<div id="kmlDiv" style="display:none;border:1px solid green;padding:.5em;">
<font size="-1"><em><strong>KML Options:</strong></em></font><br>
<label for="next">Color By</label>
<select name="next" id="next" onchange="kmlSync(this.id,this.value)">
<option value="colorByCollection">Collection</option>
<option value="colorBySpecies">Species</option>
</select>
<label for="method">Method</label>
<select name="method" id="method" onchange="kmlSync(this.id,this.value)">
<option value="download">Download</option>
<option value="link">Download Linkfile</option>
<option value="gmap">Google Maps</option>
</select>
<label for="includeTimeSpan">include Time?</label>
<select name="includeTimeSpan" id="includeTimeSpan" onchange="kmlSync(this.id,this.value)">
<option value="0">no</option>
<option value="1">yes</option>
</select>
<label for="showErrors">Show error radii?</label>
<select name="showErrors" id="showErrors" onchange="kmlSync(this.id,this.value)">
<option value="0">no</option>
<option value="1">yes</option>
</select>
</div>
</td>
---->
</tr>
</table>
<cfif isdefined("transaction_id") and len(transaction_id) gt 0>
<input type="hidden" name="transaction_id" value="#transaction_id#">
</cfif>
<input type="hidden" name="newQuery" value="1">
</form>
</cfoutput>
<script type='text/javascript' language='javascript'>
$(document).ready(function() {
var tval = document.getElementById('tgtForm').value;
changeTarget('tgtForm',tval);
//changeGrp('groupBy');
jQuery.getJSON("/component/functions.cfc",
{
method : "getSpecSrchPref",
returnformat : "json",
queryformat : 'column'
},
function (getResult) {
if (getResult == "cookie") {
var cookie = readCookie("specsrchprefs");
if (cookie != null) {
r_getSpecSrchPref(cookie);
}
} else {
r_getSpecSrchPref(getResult);
}
}
);
jQuery.get("/form/browse.cfm", function(data){
jQuery('body').append(data);
})
$("#collection_id").multiselect({
minWidth: "500",
height: "300"
});
$("#groupBy").multiselect({
//minWidth: "500",
//height: "300"
});
});
jQuery("#partname").autocomplete("/ajax/part_name.cfm", {
width: 320,
max: 50,
autofill: false,
multiple: false,
scroll: true,
scrollHeight: 300,
matchContains: true,
minChars: 1,
selectFirst:false
});
</script>
<cfinclude template = "includes/_footer.cfm">