Philip_Leftwich_CV.tex

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%	PERSONAL INFORMATION
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\name{Philip T.}{Leftwich}


\mobile{+44 7871 041 012}
\email{\href{mailto:p.leftwich@uea.ac.uk}{\nolinkurl{p.leftwich@uea.ac.uk}}}
\homepage{philip-leftwich.github.io}
\github{Philip-Leftwich}
\linkedin{philip-leftwich-117052155}
\twitter{philipleftwich}

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% 2019-02-14 Chris Umphlett - add flexibility to the document name in footer, rather than have it be static Curriculum Vitae
\makecvfooter
  {September 09, 2023}
    {Philip T. Leftwich~~~·~~~Curriculum Vitae}
  {\thepage}


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%	CV/RESUME CONTENT
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\colorlet{awesome}{awesome-skyblue}

\makeatletter
\def\@sectioncolor{\color{awesome}}
\makeatother

\hypertarget{education}{%
\section{Education}\label{education}}

\begin{cventries}
    \cventry{University of East Anglia}{PhD}{Norwich}{2009 - 2013}{\begin{cvitems}
\item Thesis: Male Reproductive Success and Population Control in the Mediterranean Fruit Fly.
\end{cvitems}}
    \cventry{Durham University}{BSc (Hons) / Zoology}{Durham}{2004 - 2008}{}\vspace{-4.0mm}
\end{cventries}

\hypertarget{employment}{%
\section{Employment}\label{employment}}

\begin{cventries}
    \cventry{Biological Sciences, University of East Anglia}{Associate Professor of Genetics  and Data Science}{Norwich}{2022 - Current}{}\vspace{-4.0mm}
    \cventry{Biological Sciences, University of East Anglia}{Lecturer}{Norwich}{2019 - 2022}{}\vspace{-4.0mm}
    \cventry{Arthropod Genetics Group, Pirbright Institute}{Postdoctoral Researcher/Project Manager}{Pirbright}{2016 - 2019}{}\vspace{-4.0mm}
    \cventry{Biological Sciences, University of East Anglia}{Lecturer in Ecology and Biodiversity}{Norwich}{2015 - 2016}{}\vspace{-4.0mm}
    \cventry{Biological Sciences, University of East Anglia}{Postdoctoral Researcher}{Norwich}{2012 - 2015}{}\vspace{-4.0mm}
\end{cventries}

\hypertarget{qualifications}{%
\section{Qualifications}\label{qualifications}}

\begin{cventries}
    \cventry{Higher Education Academy}{HEA Fellow}{York}{2016}{}\vspace{-4.0mm}
\end{cventries}

\hypertarget{teaching}{%
\section{Teaching}\label{teaching}}

\begin{cvskills}
  \cvskill
    {Module organiser}
    {Data Science for Biologists; \newline Genetics}
    
  \cvskill
    {Lecturer}
    {Genes, Genomes and Genomics; Science Communication; Skills for Biologists;\newline Microbiology;Biodiversity; Evolution, Behaviour and Ecology;\newline Medical Entomology (LSHTM)}
   
  \cvskill
    {Tutor}
    {Field Ecology; Evolution, Health and Disease}  
    
  \cvskill
    {Outreach}
    {Bioinformatics Virtual Coordination Network (https://biovcnet.github.io/); \newline The Brilliant Club, Villier's Park Educational Trust, Royal Society Summer Science} 
    
\end{cvskills}

\hypertarget{administrative-duties}{%
\section{Administrative Duties}\label{administrative-duties}}

\begin{cventries}
    \cventry{School of Biological Sciences}{Chair of Extenuating Circumstances Panel}{University of East Anglia}{2021-present}{}\vspace{-4.0mm}
    \cventry{Faculty of Science}{Statistician - Animal Welfare Ethical Review Body}{University of East Anglia}{2021-present}{}\vspace{-4.0mm}
    \cventry{School of Biological Sciences}{Student Partnership Officer}{University of East Anglia}{2019-present}{}\vspace{-4.0mm}
\end{cventries}

\newpage

\hypertarget{professional-service}{%
\section{Professional Service}\label{professional-service}}

\begin{cvskills}
  \cvskill
    {Article reviews}
    {Behavioural ecology and sociobiology; BMC biology; Insects; 
    Journal of Evolutionary Biology;\newline Phil. Transactions of the Royal Society; 
    PLoS Genetics; Proceedings of the Royal Society; Molecular Ecology}
    
  \cvskill
    {Grant reviews}
    {BBSRC Fellowships; GWIS National Fellowships}
   
  \cvskill
    {Professional memberships}
    {Genetics Society; Royal Statistical Society; Vectorbite; Nationwide Network of BioScience Educators; \newline Advance HE; SORTEE}  
  
  \cvskill
    {Panel memberships}
    {Open University Programme Validation; SORTEE Education and Outreach Committee}  
    
\end{cvskills}

\hypertarget{consultancy}{%
\section{Consultancy}\label{consultancy}}

\begin{cventries}
    \cventry{Author}{OUP}{Oxford}{2020-present}{\begin{cvitems}
\item Maths Skills for A-level Biology 2nd Edition: a practical handbook: https://amzn.to/3xjUUlN
\item The Scientific Method and Experimental Design (In prep) - part of the Oxford Biology Primers book series
\end{cvitems}}
    \cventry{Consultant and content developer}{Benchling}{San Francisco}{2020-2022}{\begin{cvitems}
\item Consultancy and speaking
\item Content developer: https://www.benchling.com/educators/
\end{cvitems}}
    \cventry{Instructor}{Physalia Courses}{Online}{2019-present}{\begin{cvitems}
\item An Introduction to Population Genomics: analysing NGS data and SNP calling
\item An introduction to R and Statistics for Ecologists
\end{cvitems}}
    \cventry{Programme Developer}{OCR}{Oxford}{2016-present}{\begin{cvitems}
\item Maths for Biology: Online workshops for secondary school teachers
\end{cvitems}}
\end{cventries}

\hypertarget{presentations}{%
\section{Presentations}\label{presentations}}

\hypertarget{education-1}{%
\subsection{Education}\label{education-1}}

\begin{cventries}
    \cventry{Speaker}{Heads of University Biosciences}{Norwich}{2022}{\begin{cvitems}
\item ``The fundamentals of data management and analysis''
\end{cvitems}}
    \cventry{Speaker}{AMSCUE}{Online}{2021}{\begin{cvitems}
\item ``Online molecular biology labs''
\end{cvitems}}
    \cventry{Speaker}{OCR Science Forum}{Online}{2021}{\begin{cvitems}
\item The impact of COVID-19, present and future
\end{cvitems}}
    \cventry{Speaker}{HUBS Bio-Summit}{Online}{2020}{\begin{cvitems}
\item ``Using electronic lab notebooks to improve reflective practises in learning''
\end{cvitems}}
    \cventry{Speaker}{Dry Labs Real Science}{Online}{2020}{\begin{cvitems}
\item ``Molecular biology tools for online teaching''
\end{cvitems}}
    \cventry{Invited Speaker}{Higher Education Academy Talks}{Online}{2020}{\begin{cvitems}
\item ``Synchronous on-line teaching in the biomedical sciences - Discovering how coronavirus PCR testing works''
\end{cvitems}}
\end{cventries}

\hypertarget{research}{%
\subsection{Research}\label{research}}

\begin{cventries}
    \cventry{Speaker}{UNIPI International Workshop on Multidisciplinary studies for sustainable agriculture}{Pisa}{2021}{\begin{cvitems}
\item ``Evolutionary biology and genetic pest control''
\end{cvitems}}
    \cventry{Plenary}{UEA CEEC Rebellion}{Online}{2021}{\begin{cvitems}
\item ``Genetic pest management: knocking out pest species with applied genetics''
\end{cvitems}}
    \cventry{Invited Speaker}{Entomological Society of America}{Vancouver}{2018}{\begin{cvitems}
\item ``Localised gene drives for insect population control''
\end{cvitems}}
    \cventry{Speaker}{Society of Molecular Biology \& Evolution}{Vienna}{2015}{\begin{cvitems}
\item ``The microbiome of the Mediterranean fruit fly''
\end{cvitems}}
    \cventry{Invited Speaker}{Department of Genetics}{Cambridge}{2014}{\begin{cvitems}
\item ``An introduction to genetic pest management''
\end{cvitems}}
    \cventry{Speaker}{Evolution}{Ottawa}{2012}{\begin{cvitems}
\item ``What makes a successful male? Strategies for improved insect pest management''
\end{cvitems}}
\end{cventries}

\hypertarget{grants}{%
\section{Grants}\label{grants}}

\begin{cventries}
    \cventry{Gifts that keep on giving: maternal effects and insect pest control}{BBSRC}{University of East Anglia}{2020}{\begin{cvitems}
\item PhD studentship
\item Co-supervisor
\item Funding amount 100,000 GBP
\end{cvitems}}
    \cventry{CRISPR Cas9 based sex-conversion gene drives for pest insect management}{BBSRC}{University of East Anglia}{2019}{\begin{cvitems}
\item PhD studentship
\item Co-supervisor
\item Funding amount 100,000 GBP
\end{cvitems}}
    \cventry{Entomology Program Enhancement}{Entomological Society of America}{Pirbright Institute}{2018}{\begin{cvitems}
\item Travel
\item Funding amount 1000 GBP
\end{cvitems}}
    \cventry{Introduction to bioinformatics resources for vector genomics studies}{Infravec}{Pirbright Institute}{2018}{\begin{cvitems}
\item Training
\item Funding amount 460 GBP
\end{cvitems}}
    \cventry{Colonization, Domestication and Population control in pest insects}{BBSRC}{University of East Anglia}{2012}{\begin{cvitems}
\item Research grant
\item Researcher Co-I
\item Funding amount 376,000 GBP
\end{cvitems}}
\end{cventries}

\newpage

\hypertarget{publications}{%
\section{Publications}\label{publications}}

\textbf{Google Scholar metrics:}

\begingroup
\setlength{\parindent}{0.2in}

\textbf{h-index: 14}

\textbf{publications: 27} \endgroup

\hypertarget{refereed-journal-papers}{%
\subsection{Refereed Journal Papers}\label{refereed-journal-papers}}

\begingroup
\setlength{\parindent}{0.2in}

\hypertarget{refs_journals}{}
\leavevmode\hypertarget{ref-26}{}%
Harvey-Samuel, T., Feng, X., Okamoto, E. M., Purusothaman, D. K., \&
\textbf{Leftwich,} P. T. (2023). CRISPR-based gene drives generate
super-mendelian inheritance in the disease vector culex
quinquefasciatus. \emph{Nature Communications}, \emph{2023}.

\leavevmode\hypertarget{ref-25}{}%
Paladino, L. Z. C., Wilson, R., Tng, P. Y. L., Dhokiya, V., Keen, E., \&
Cuber, P. (2023). Optimizing CRE and PhiC31 mediated recombination in
aedes aegypti. \emph{Frontiers in Biotechnology}, \emph{2023}.

\leavevmode\hypertarget{ref-24}{}%
Sprigg, C., \textbf{Leftwich,} P. T., Burton, E., Scholey, D., Bedford,
M. R., \& Brearley, C. A. (2023). Accentuating the positive and
eliminating the negative: Efficacy of TiO2 as digestibility index marker
for poultry nutrition studies. \emph{PloS One}, \emph{18}(6).

\leavevmode\hypertarget{ref-22}{}%
Darrington, M., \textbf{Leftwich,} P., Holmes, N., Friend, L., Clarke,
N., Worsley, S., Margaritopolous, J., Hogenhout, S., Hutchings, M., \&
Chapman, T. (2022). Characterisation of the symbionts in the
{Mediterranean} fruitfly gut. \emph{Microbial Genomics}.

\leavevmode\hypertarget{ref-23}{}%
Siddall, A., Harvey-Samuel, T., Chapman, T., \& \textbf{Leftwich,} P. T.
(2022). Manipulating insect sex determination pathways for genetic pest
management: Opportunities and challenges. \emph{Frontiers in
Bioengineering and Biotechnology}, \emph{10}.

\leavevmode\hypertarget{ref-21}{}%
Xu, X., Harvey-Samuel, T., Siddiqui, H. A., Ang, J. X. D., Anderson, M.
E., Christine M Reitmayer, E. L., \textbf{Leftwich,} P. T., You, M., \&
Alphey, L. (2022). Toward a CRISPR-Cas9-based gene drive in the
diamondback moth \emph{{Plutella} xylostella}. \emph{The CRISPR
Journal}.

\leavevmode\hypertarget{ref-19}{}%
Harvey-Samuel, T., Xu, X., Lovett, E., Dafa'alla, T., Walker, A.,
Norman, V., Carter, R., Teal, J., Akilan, L., \textbf{Leftwich,} P., \&
Alphey, L. (2021). Engineered expression of the invertebrate-specific
scorpion toxin {AaHIT} reduces adult longevity and female fecundity in
the diamondback moth \emph{{Plutella} xylostella}. \emph{Pest Management
Science}, \emph{77}(7), 3154--3164.

\leavevmode\hypertarget{ref-13}{}%
\textbf{Leftwich,} P., Spurgin, L., Harvey-Samuel, T., Thomas, C.,
Paladino, L., Edgington, M., \& Alphey, L. (2021). Genetic pest
management and the background genetics of release strains.
\emph{Philosophical Transactions of the Royal Society B},
\emph{376}(1818).

\leavevmode\hypertarget{ref-20}{}%
Tully, B., Buongiorno, J., Cohen, A., Cram, J., Garber, A., Hu, S.,
Krinos, A., \textbf{Leftwich,} P., Marshall, A., Sieradzki, E., Speth,
D., Suter, E., Trivedi, C., Valentin-Alvarado, L., Weissman, J., Lee,
M., Alexander, H., Collins, R., Pachiadaki, M., Rhodes, A., \& Decatur,
W. (2021). The {Bioinformatics} {Virtual} {Coordination} {Network}: An
open-source and interactive learning environment. \emph{Frontiers in
Education}.

\leavevmode\hypertarget{ref-11}{}%
Anderson, M., Purcell, J., Verkuijl, S., Norman, V., \textbf{Leftwich,}
P., Harvey-Samuel, T., \& Alphey, L. (2020). Expanding the CRISPR
toolbox in {Culicine} mosquitoes: In vitro validation of pol III
promoters. \emph{ACS Synthetic Biology}, \emph{9}(3), 678--681.

\leavevmode\hypertarget{ref-14}{}%
\textbf{Leftwich,} P., Edgington, M., \& Chapman, T. (2020).
Transmission efficiency drives host--microbe associations.
\emph{Proceedings of the Royal Society B}, \emph{287}(1934).

\leavevmode\hypertarget{ref-16}{}%
Tng, P., Paladino, L., Verkuijl, S., Purcell, J., Merits, A.,
\textbf{Leftwich,} P., Fragkoudis, R., Noad, R., \& Alphey, L. (2020).
Cas13b-dependent and {Cas}13b-independent {RNA} knockdown of viral
sequences in mosquito cells following guide {RNA} expression.
\emph{Communications Biology}, \emph{3}(1), 1--9.

\leavevmode\hypertarget{ref-15}{}%
\textbf{Leftwich,} P., Nash, W., Friend, L., \& Chapman, T. (2019).
Contribution of maternal effects to dietary selection in {Mediterranean}
fruit flies. \emph{Evolution}, \emph{73}(2), 278--292.

\leavevmode\hypertarget{ref-6}{}%
Redford, K., Brooks, T., Macfarlane, N., Adams, J., Alphey, L., Bennet,
E., Delborne, J., Eggermont, H., Esvelt, K., Kingirl, A., Kokotovich,
A., Kolodziejczyk, B., Kuiken, T., Mead, A., Oliva, M., Perello, E.,
Slobodian, L., Thizy, D., Tompkins, D., Winter, G., Campbell, K.,
Elsensohn, J., Holmes, N., Farmer, C., Keitt, B., \textbf{Leftwich,} P.,
Maloney, T., Masiga, D., Newhouse, A., Novak, B., \ldots{} Oppen, M.
(2019). \emph{Genetic frontiers for conservation: An assessment of
synthetic biology and biodiversity conservation}.

\leavevmode\hypertarget{ref-17}{}%
\textbf{Leftwich,} P., \& Chapman, T. (2018). Testing for assortative
mating by diet in \emph{{Drosophila} melanogaster}. \emph{Bio-Protocol},
\emph{8}(20).

\leavevmode\hypertarget{ref-3}{}%
\textbf{Leftwich,} P., Clarke, N., Hutchings, M., \& Chapman, T. (2018).
Gut microbiomes and reproductive isolation in \emph{drosophila} (vol
114, pg 12767, 2017). \emph{Proceedings of the National Academy of
Sciences}, \emph{115}(10).

\leavevmode\hypertarget{ref-10}{}%
\textbf{Leftwich,} P., Clarke, N., Hutchings, M., \& Chapman, T. (2018).
Reply to obadia et al.: Effect of methyl paraben on host--microbiota
interactions in \emph{{Drosophila} melanogaster}. \emph{Proceedings of
the National Academy of Sciences}, \emph{201805499}.

\leavevmode\hypertarget{ref-5}{}%
\textbf{Leftwich,} P., Edgington, M., Harvey-Samuel, T., Paladino, L.,
Norman, V., \& Alphey, L. (2018). Recent advances in threshold-dependent
gene drives for mosquitoes. \emph{Biochemical Society Transactions},
\emph{46}(5), 1203--1212.

\leavevmode\hypertarget{ref-12}{}%
\textbf{Leftwich,} P., Hutchings, M., \& Chapman, T. (2018). Diet, gut
microbes and host mate choice: Understanding the significance of
microbiome effects on host mate choice requires a case by case
evaluation. \emph{Bioessays}, \emph{40}(12).

\leavevmode\hypertarget{ref-8}{}%
\textbf{Leftwich,} PT., Clarke, NV. E., Hutchings, MI., \& Chapman, T.
(2018). Reply to rosenberg et al.: Diet, gut bacteria, and assortative
mating in \emph{{Drosophila} melanogaster}. \emph{Proceedings of the
National Academy of Sciences, Https://Doi.org/}, \emph{10}.

\leavevmode\hypertarget{ref-9}{}%
\textbf{Leftwich,} P., Nash, W., Friend, L., \& Chapman, T. (2017).
Adaptation to divergent larval diets in the medfly, \emph{{Ceratitis}
capitata}. \emph{Evolution}, \emph{71}(2), 289--303.

\leavevmode\hypertarget{ref-7}{}%
Longdon, B., Day, J., Schulz, N., \textbf{Leftwich,} P., Jong, Ma.,
Breuker, C., Gibbs, M., Obbard, D., Wilfert, L., Smith, S., McGonigle,
J., Houslay, T., Wright, L., Livraghi, L., Evans, L., Friend, L.,
Chapman, T., Vontas, J., Kambouraki, N., \& Jiggins, F. (2017).
Vertically transmitted rhabdoviruses are found across three insect
families and have dynamic interactions with their hosts.
\emph{Proceedings of the Royal Society B: Biological Sciences},
\emph{284}(1847).

\leavevmode\hypertarget{ref-1}{}%
\textbf{Leftwich,} P., Bolton, M., \& Chapman, T. (2016). Evolutionary
biology and genetic techniques for insect control. \emph{Evolutionary
Applications}, \emph{9}(1), 212--230.

\leavevmode\hypertarget{ref-2}{}%
\textbf{Leftwich,} P., Koukidou, M., Rempoulakis, P., Gong, H.-F.,
Zacharopoulou, A., Fu, G., Chapman, T., Economopoulos, A., Vontas, J.,
\& Alphey, L. (2014). Genetic elimination of field-cage populations of
{Mediterranean} fruit flies. \emph{Proceedings of the Royal Society B:
Biological Sciences}, \emph{281}(1792).

\leavevmode\hypertarget{ref-18}{}%
Alphey, L., Ant, T., Koukidou, M., \textbf{Leftwich,} P., Rempoulakis,
P., Vontas, J., Economopoulos, A., \& Chapman, T. (2012). Genetic
improvements to sterile-male control of tephritid fruit flies.
\emph{Tephritid Workers of Europe and Middle East (TEAM),
Https://Nucleus.iaea.org/Sites/Naipc/Twd/Newsletters/11th}, \emph{2}.

\leavevmode\hypertarget{ref-4}{}%
\textbf{Leftwich,} P., Edward, D., Alphey, L., Gage, M., \& Chapman, T.
(2012). Variation in adult sex ratio alters the association between
courtship, mating frequency and paternity in the lek-forming fruitfly
\emph{{Ceratitis} capitata}. \emph{Journal of Evolutionary Biology},
\emph{25}(9), 1732--1740.

\endgroup

\hypertarget{working-papers-under-revision-or-review}{%
\subsection{Working Papers under Revision or
Review}\label{working-papers-under-revision-or-review}}

\begingroup
\setlength{\parindent}{0.2in}

\hypertarget{refs_working_paper}{}
\leavevmode\hypertarget{ref-4}{}%
Anderson, M. A. E., \textbf{Leftwich,} P. T., Wilson, R., Paladino, L.
Z. C., \& Basu, S. (2023). AePUb promoter length modulates gene
expression in aedes aegypti. \emph{bioRxiv}, \emph{2023}.

\leavevmode\hypertarget{ref-2}{}%
\textbf{Leftwich,} P. T., Purcell, J. C., Anderson, M. A. E.,
Fragkoudis, R., Basu, S., \& Lycett, G. T. (2023). A synthetic biology
approach to transgene expression. \emph{bioRxiv}, \emph{2023}.

\leavevmode\hypertarget{ref-3}{}%
Meccariello, A., Hou, S., Davydova, S., Fawcett, J., Siddall, A., \&
\textbf{Leftwich,} P. T. (2023). Gene drive and genetic sex conversion
in the global agricultural pest ceratitis capitata. \emph{bioRxiv},
\emph{2023}.

\leavevmode\hypertarget{ref-1}{}%
Anderson, M. A. E., Gonzalez, E., Edgington, M. P., De Ang, J. X.,
Purusothaman, D.-K., Shackleford, L., Nevard, K., Verkuijl, S. A.,
Harvey-Samuel, T., \textbf{Leftwich,} P. T., Esvelt, K., \& Alphey, L.
(2022). A multiplexed, confinable CRISPR/Cas9 gene drive propagates in
caged aedes aegypti populations. \emph{bioRxiv}.

\endgroup

\hypertarget{books}{%
\subsection{Books}\label{books}}

\begingroup
\setlength{\parindent}{0.2in}

\hypertarget{refs_proceedings}{}
\leavevmode\hypertarget{ref-1}{}%
Penny, J., \& \textbf{Leftwich,} P. (2018). \emph{Maths skills for
{A-level} biology} {[}Book{]}. OUP (Oxford).

\endgroup

\newpage

\hypertarget{skills}{%
\section{Skills}\label{skills}}

\begin{cvskills}
  \cvskill
    {Programming}
    {R (advanced); Python (Intermediate); Julia}
    
  \cvskill
    {Reproducible Reports}
    {Markdown/RMarkdown; R Shiny Apps, LaTex, Binder, Pandoc}
   
  \cvskill
    {DevOps}
    {Git, AWS}  
    
  \cvskill
    {Front-End}
    {HTML/CSS, WordPress} 
    
  \cvskill
    {Back-end}
    {Unix/Linux Shell}
    
  \cvskill
    {Quantitative}
    {Linear Mixed Modelling; Supervised/Unsupervised Machine Learning; Bayesian; \newline High-throughput data analysis, Dimensionality Reduction; Amplicon analysis; SNP analysis}
    
  \cvskill
    {Lab skills}
    {Insect rearing; Behavioural Analysis; Transgenics; CRISPR/Cas9; Molecular cloning; \newline Cell Culture; Microbiology}
    
\end{cvskills}

\begin{itemize}
\tightlist
\item
  This CV is a reproducible project; all the source code behind this CV
  is available on \href{https://github.com/Philip-Leftwich/PL_CV}{this
  GitHub repo}.
\end{itemize}

\includegraphics[width=0.25\textwidth,height=0.1\textheight]{data/PL_sig.png}/

\end{document}