Skip to content

Latest commit

 

History

History
58 lines (33 loc) · 2.15 KB

NEWS.md

File metadata and controls

58 lines (33 loc) · 2.15 KB

MOVICS 0.99.5

  • Minimal version of R was declined to 4.0.1.
  • Two functions were added.
  • Troubleshooting section was updated.

MOVICS 0.99.6

  • Add an error notification prompt: current version of MOVICS can support up to 6 omics datasets and at least 2 datasets must be provided.
  • Fix bugs when providing more than one binary matrix.
  • Remove argument of is.binary in getIntNMF(), please use type instead.

MOVICS 0.99.7

  • Fix bugs when setting argument of N.clust as 2 in getConsensusClustering().

MOVICS 0.99.8

  • Fix bugs where argument of fig.path is useless in getSilhouette().

MOVICS 0.99.9

  • Fix bugs in compTMB() if the maximum number of x-axis is less than 3.

MOVICS 0.99.10

  • Fix bugs in compAgree() if argument of subt2comp has more than 2 variables.
  • Move heatmap legend and annotation legend to the left in runMarker() and runGSVA(), and return the complexheatmap object for further modification if necessary.

MOVICS 0.99.11

  • Fix bugs in compFGA() that poses error when only 2 subtypes were identified.

MOVICS 0.99.12

  • Correct help document of drugs argument in compDrugsen().

MOVICS 0.99.13

  • Fix bug in compClinvar() if the column clust stored in moic.res$clust is not located in the second.

MOVICS 0.99.14

MOVICS 0.99.15

  • Since error occurs when I use the GitHub version of ComplexHeatmap to concatenate heatmaps, I replace the requirement for this package by using its Bioconductor version.
  • R package of SNFtool has been removed from the CRAN repository, I replaced this by using GitHub version (https://github.com/maxconway/SNFtool).

MOVICS 0.99.16

  • Fix bug in runMarker() if argument of doPlot was set as FALSE.

MOVICS 0.99.17

  • Fix bug in installing MOVICS regarding the latest version of ggpmisc. The dependency ggpmisc was replaced by ggpp for using geom_table().
  • Modify compSurv() and by default the survival curve will present the entire survival time range instead of 10-year cutoff unless specified by the user.