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Run error #283

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zarbuk opened this issue Oct 1, 2024 · 1 comment
Open

Run error #283

zarbuk opened this issue Oct 1, 2024 · 1 comment

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@zarbuk
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zarbuk commented Oct 1, 2024

Hello ,
I keep getting this error while running the script for generating the backbone while using motif scaffolding with target. Can someone let me know what is the issue?
I do get around 25-105 designs and the run are aborted.

my runs are getting terminated prematurely for RF diffusion and I end up getting this error times and again:

Traceback (most recent call last):
File "/home/zbukhari/RFdiffusion/scripts/run_inference.py", line 94, in main
px0, x_t, seq_t, plddt = sampler.sample_step(
File "/home/zbukhari/RFdiffusion/rfdiffusion/inference/model_runners.py", line 695, in sample_step
x_t_1, px0 = self.denoiser.get_next_pose(
File "/home/zbukhari/RFdiffusion/rfdiffusion/inference/utils.py", line 471, in get_next_pose
frames_next = get_next_frames(
File "/home/zbukhari/RFdiffusion/rfdiffusion/inference/utils.py", line 67, in get_next_frames
] = diffuser.so3_diffuser.reverse_sample_vectorized(
File "/home/zbukhari/RFdiffusion/rfdiffusion/diffusion.py", line 500, in reverse_sample_vectorized
scipy_R.from_matrix(R_0t.cpu().numpy()).as_rotvec()
File "_rotation.pyx", line 759, in scipy.spatial.transform._rotation.Rotation.from_matrix
File "_rotation.pyx", line 19, in scipy.spatial.transform._rotation._empty2

Regards,
Zara

@zarbuk
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zarbuk commented Oct 7, 2024

@RosettaCommons/industrialcontributors can someone help me with this issue please?
@lyskov
@decarboxy
@javierbq
@aleaverfay

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