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toolbars.R
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# sidebar -----------------------------------------------------------------
left_nav <-
dashboardSidebar(
# add person customization
sidebarUserPanel(
image = img(src="staple.png"),
name = "Hi User!"
),
# add menu
sidebarMenu(
id = "left_sidebarmenu",
menuItem(
"Users",
tabName = "item1",
icon = icon("user")
),
menuItem(
"Projects",
tabName = "item2",
icon = icon("bars-progress")
),
menuItem(
"Tasks",
tabName = "item3",
icon = icon("list-check")
)
),
# side bar rules
disable = FALSE,
width = NULL,
skin = "light",
status = "primary",
elevation = 4,
collapsed = TRUE,
minified = FALSE,
expandOnHover = TRUE,
fixed = TRUE,
id = "left_sidebar",
customArea = NULL
)
# top nav -----------------------------------------------------------------
top_nav <-
dashboardHeader(
title = "STAPLE",
titleWidth = NULL,
disable = FALSE,
.list = NULL,
skin = "light",
status = "white",
border = TRUE,
compact = FALSE,
sidebarIcon = shiny::icon("bars"),
controlbarIcon = shiny::icon("th"),
fixed = FALSE,
leftUi = NULL,
rightUi = NULL
)
# right nav ---------------------------------------------------------------
right_nav <-
dashboardControlbar(
id = NULL,
disable = FALSE,
width = 250,
collapsed = TRUE,
overlay = TRUE,
skin = "dark",
pinned = NULL
)
# bottom nav --------------------------------------------------------------
bottom_nav <- dashboardFooter(
left = a(
href = "https://aggieerin.com",
target = "_blank", "@aggieerin"
),
right = "STAPLE Demo 2023"
)
# body nav ----------------------------------------------------------------
body_nav <-
dashboardBody(
tabItems(
# tab for people ----
tabItem(
tabName = "item1",
fluidRow(
tabBox(
title = tags$b("Add and Edit Collaborators"),
#collapsible = TRUE,
#solidHeader = TRUE,
#status = "primary",
width = 12,
id = "user_box",
tabPanel("Add User",
textInput(inputId = "add_orcid",
label = "ORCID of User",
value = "",
width = NULL,
placeholder = NULL),
actionBttn("user_add_button",
label = "Add New User",
style = "material-flat",
size = "sm",
color = "primary"),
DTOutput("orcid_table_update")
),
tabPanel("Edit User",
DTOutput("orcid_table"),
actionBttn("user_save_button",
label = "Save User Edits",
style = "material-flat",
size = "sm",
color = "primary")
) #tab panel
) # box
) #fluidrow
), #tabItem
# tab for projects ----
tabItem(
tabName = "item2",
fluidRow(
tabBox(
title = tags$b("Add and Edit Projects"),
#collapsible = TRUE,
#solidHeader = TRUE,
#status = "primary",
width = 12,
id = "project_box",
# add project ----
tabPanel("Add Project",
textInput(
inputId = "add_project_title",
label = "Project Title"
),
selectInput(
inputId = "add_project_template",
label = "Project Template",
choices = c("Experiment",
"Meta-Analysis",
"Qualitative",
"Biological",
"Simulation"),
selected = NULL,
multiple = FALSE,
selectize = TRUE
),
actionBttn("save_new_project",
label = "Create New Project",
style = "material-flat",
size = "sm",
color = "primary")
),
# spaml ----
tabPanel("SPAML",
# put cards here
sortable(
width = 12,
box(
title = "Project Metadata",
width = 12,
DTOutput("spam_project_table"),
id = "spam1"
),
box(
title = "Ethics",
width = 12,
DTOutput("spam_ethics_table"),
id = "spam2"
),
box(
title = "Materials",
width = 12,
DTOutput("spam_materials_table"),
id = "spam3"
),
box(
title = "Pre-Registration",
width = 12,
DTOutput("spam_prereg_table"),
id = "spam4"
),
box(
title = "Analyses",
width = 12,
DTOutput("spam_analyses_table"),
id = "spam5"
),
box(
title = "Manuscript",
width = 12,
DTOutput("spam_manuscript_table"),
id = "spam6"
),
box(
title = "CRediT",
width = 12,
DTOutput("spam_credit_table"),
id = "spam7",
actionBttn("spaml_credit_ten",
label = "Create tenzing",
style = "material-flat",
size = "sm",
color = "primary"),
actionBttn("spaml_yaml",
label = "Create yaml",
style = "material-flat",
size = "sm",
color = "primary")
),
box(
title = "Tasks",
width = 12,
DTOutput("spam_task_table"),
id = "spam8"
)
),
actionBttn("save_spaml",
label = "Save Project Data",
style = "material-flat",
size = "sm",
color = "primary")
), # close tabpanel
# TOD ----
tabPanel("Table of Doom",
sortable(
width = 12,
box(
title = "Project Metadata",
width = 12,
DTOutput("tod_project_table"),
id = "tod1"
),
box(
title = "Materials",
width = 12,
DTOutput("tod_materials_table"),
id = "tod2"
),
box(
title = "Analyses",
width = 12,
DTOutput("tod_analyses_table"),
id = "tod3"
),
box(
title = "Manuscript",
width = 12,
DTOutput("tod_manuscript_table"),
id = "tod4"
),
box(
title = "CRediT",
width = 12,
DTOutput("tod_credit_table"),
actionBttn("tod_credit_ten",
label = "Create tenzing",
style = "material-flat",
size = "sm",
color = "primary"),
actionBttn("tod_yaml",
label = "Create yaml",
style = "material-flat",
size = "sm",
color = "primary"),
id = "tod5"
),
box(
title = "Tasks",
width = 12,
DTOutput("tod_task_table"),
id = "tod6"
)
),
actionBttn("save_tod",
label = "Save Project Data",
style = "material-flat",
size = "sm",
color = "primary")
) #tabpanel
) #tab box
) # fluid row
), # tabitem
# tab for tasks ----
tabItem(
tabName = "item3",
fluidRow(
tabBox(
title = tags$b("Add and Edit Tasks"),
#collapsible = TRUE,
#solidHeader = TRUE,
#status = "primary",
width = 12,
id = "task_box",
# add project ----
tabPanel("Add Task",
textInput(
inputId = "add_info_task",
label = "Task Information"
),
selectInput(
inputId = "add_project_task",
label = "Associated Task Project",
choices = c("None" = "none",
"SPAML" = "spaml",
"Table of Doom" = "tod"),
selected = NULL,
multiple = FALSE,
selectize = TRUE
),
selectInput(
inputId = "add_user_task",
label = "Associated User",
choices = c("None" = "none",
"Erin Buchanan" = "0000-0002-9689-4189",
"Savannah Lewis" = "0000-0002-9689-5864",
"John Smith" = "0000-0002-5827-2084"),
selected = NULL,
multiple = FALSE,
selectize = TRUE
),
actionBttn("save_new_task",
label = "Create New Task",
style = "material-flat",
size = "sm",
color = "primary")
),
# spaml ----
tabPanel("Edit Tasks",
fluidRow(
DTOutput("current_task_table"),
actionBttn("edit_tasks",
label = "Save Task Data",
style = "material-flat",
size = "sm",
color = "primary")
) # close fluidrow
) # close tabpanel
) # close tabbox
) #fluidrow
) #tabItem
) # overall tabitems
) # dashboard body