NAMESPACE

# Generated by roxygen2: do not edit by hand

export(fastRUVIII)
export(getAdjustedMat)
export(ruvSimulate)
export(scMerge)
export(scMerge2)
export(scMerge2h)
export(scRUVIII)
export(scRUVg)
export(scReplicate)
export(scSEGIndex)
export(sce_cbind)
import(BiocParallel)
import(SingleCellExperiment)
import(SummarizedExperiment)
import(ruv)
importFrom(BiocNeighbors,AnnoyParam)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpparam)
importFrom(BiocSingular,ExactParam)
importFrom(BiocSingular,runExactSVD)
importFrom(BiocSingular,runSVD)
importFrom(DelayedArray,DelayedArray)
importFrom(DelayedArray,colMeans)
importFrom(DelayedArray,colSums)
importFrom(DelayedArray,rowMeans)
importFrom(DelayedArray,rowSums)
importFrom(DelayedArray,sweep)
importFrom(DelayedArray,t)
importFrom(DelayedMatrixStats,colMeans2)
importFrom(DelayedMatrixStats,colSums2)
importFrom(DelayedMatrixStats,rowMeans2)
importFrom(DelayedMatrixStats,rowMedians)
importFrom(DelayedMatrixStats,rowSums2)
importFrom(M3Drop,BrenneckeGetVariableGenes)
importFrom(S4Vectors,metadata)
importFrom(batchelor,cosineNorm)
importFrom(cvTools,cvFolds)
importFrom(distr,igamma)
importFrom(igraph,cluster_louvain)
importFrom(methods,as)
importFrom(methods,is)
importFrom(proxyC,dist)
importFrom(proxyC,simil)
importFrom(ruv,replicate.matrix)
importFrom(scater,normalizeCounts)
importFrom(scran,buildSNNGraph)
importFrom(scran,getTopHVGs)
importFrom(scran,modelGeneVar)