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DESCRIPTION
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Package: scdneySpatialBiocAsia2024
Title: Unlocking single cell spatial omics analyses with scdney
Version: 2.0.1
Authors@R:
c(person(given = "Farhan", family = "Ameen", role = c("aut", "cre"), email = "[email protected]"),
person(given = "Alex", family = "Qin", email = "[email protected]", role = c("aut")),
person(given = "Shreya", family = "Rao", email = "[email protected]", role = c("aut")),
person(given = "Ellis", family = "Patrick", role = c("aut"), email = "[email protected]"))
Description: This workshop introduces an analysitical framwork for analysisng data from high dimensional spatial omics technologies,
using functionality from packages developed by the Sydney Precision Data Science Center.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 3.5.0),
Biobase,
SpatialDatasets,
simpleSeg,
FuseSOM,
lisaClust,
spicyR,
Statial,
ClassifyR,
tidySingleCellExperiment,
tidyverse,
SingleCellExperiment,
cytomapper,
scater,
glmnet,
knitr
Suggests:
rmarkdown,
pkgdown
URL: https://sydneybiox.github.io/scdneySpatial_BiocAsia2024/
BugReports: https://github.com/SydneyBioX/scdneySpatial_BiocAsia2024/issues/new/choose
VignetteBuilder: knitr
DockerImage: ghcr.io/sydneybiox/scdneyspatial_biocasia2024:latest