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Nightly feedstock build failed #122

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github-actions bot opened this issue Apr 3, 2024 · 6 comments
Closed

Nightly feedstock build failed #122

github-actions bot opened this issue Apr 3, 2024 · 6 comments
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nightly-failure Nightly Azure build failed

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@github-actions
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github-actions bot commented Apr 3, 2024

Nightly feedstock build failure for tiledbsoma-feedstock at https://dev.azure.com/TileDB-Inc/CI/_build?definitionId=43&_a=summary

@github-actions github-actions bot added the nightly-failure Nightly Azure build failed label Apr 3, 2024
@jdblischak
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jdblischak commented Apr 3, 2024

All the jobs failed with a similar error:

[ 86%] Building C object src/CMakeFiles/TILEDB_SOMA_OBJECTS.dir/utils/nanoarrow.c.o
cc1: error: command-line option '-fvisibility-inlines-hidden' is valid for C++/ObjC++ but not for C [-Werror]
cc1: all warnings being treated as errors
make[5]: *** [src/CMakeFiles/TILEDB_SOMA_OBJECTS.dir/build.make:342: src/CMakeFiles/TILEDB_SOMA_OBJECTS.dir/utils/nanoarrow.c.o] Error 1
make[5]: *** Waiting for unfinished jobs....
make[4]: *** [CMakeFiles/Makefile2:100: src/CMakeFiles/TILEDB_SOMA_OBJECTS.dir/all] Error 2
make[3]: *** [Makefile:136: all] Error 2
make[2]: *** [CMakeFiles/libtiledbsoma.dir/build.make:86: libtiledbsoma-prefix/src/libtiledbsoma-stamp/libtiledbsoma-build] Error 2
make[1]: *** [CMakeFiles/Makefile2:85: CMakeFiles/libtiledbsoma.dir/all] Error 2
make: *** [Makefile:91: all] Error 2

I assume this was caused by PR single-cell-data/TileDB-SOMA#2188 to update and refactor nanoarrow, which was merged yesterday.

@eddelbuettel
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eddelbuettel commented Apr 3, 2024

Yes. We had to remove -Werror as a blunt tool. We 'removed the removal' hence the re-appearance of the error.

@jdblischak
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Potential fix in single-cell-data/TileDB-SOMA#2366

@eddelbuettel
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Turned into a sequences of fixes and I remain a little perplexed why we needed them. Following single-cell-data/TileDB-SOMA@39f73ef there is now more green in the CI (while it is still running).

@johnkerl
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johnkerl commented Apr 3, 2024

See also for follow-up
single-cell-data/TileDB-SOMA#2362

@jdblischak
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Closing now that single-cell-data/TileDB-SOMA#2366 was merged

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