From 892a2a20822e9dbfe03dce3cb06414ceb3ab2fd6 Mon Sep 17 00:00:00 2001 From: Chia Sin Liew Date: Wed, 25 Sep 2024 11:15:00 -0500 Subject: [PATCH] Fix the qualifier for the QUANT step and minor typo The original input qualifier for index ("path") would only run one sample, changing it to "each" will run all samples when running the Nextflow file. --- episodes/11-Simple_Rna-Seq_pipeline.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/episodes/11-Simple_Rna-Seq_pipeline.md b/episodes/11-Simple_Rna-Seq_pipeline.md index 965d8032..0ec82566 100644 --- a/episodes/11-Simple_Rna-Seq_pipeline.md +++ b/episodes/11-Simple_Rna-Seq_pipeline.md @@ -489,7 +489,7 @@ The script `script4.nf`; process QUANT { input: - path index + each index tuple val(pair_id), path(reads) output: @@ -731,7 +731,7 @@ ch1.collect().view() ::::::::::::::::::::::::::::::::::::::: challenge -## Combing operators +## Combining operators Which is the correct way to combined `mix` and `collect` operators so that you have a single channel with one List item?