index.qmd

---
# We need a title here to avoid picking up comments from other pages via GitHub
# fuzzy matching. It can also be disabled in giscus via `data-strict=1` but
# quarto doesn't support it yet.
# title: Welcome to Epiverse-TRACE
# image: Epiverse-RGB.svg
css: hexwall.css
comments: false
about:
  template: marquee
  links:
    - icon: github
      text: Github
      href: https://github.com/epiverse-trace
    - icon: twitter
      text: Twitter
      href: https://twitter.com/Epiverse_TRACE
format: 
  html:
    css: styles/stylesheet-homepage.css
include-in-header:
  text: |
    <script src="https://cdn.tailwindcss.com"></script>
    <script>
        tailwind.config = {
            corePlugins: {
                preflight: true,
            },
            prefix: 'tw-',
        }
    </script>
resources: 
  - public/*
---

<!-- markdownlint-disable MD041 -->
{{< react Hero >}}
<!-- markdownlint-enable MD041 -->

{{< react LogoCloud >}}

{{< react Usp >}}

{{< react Benefits >}}

{{< react Cta >}}

<!-- 
Our aim is to help change how analytics are used in the global infectious disease response, moving towards integrated, generalisable and scalable community-driven software.

## Roadmap

![ ](task_pipeline-minimal.svg){fig-alt='A typical epidemiological pipeline presented as a flowchart. Each box corresponds to a specific task (e.g., "reconstruct transmission chains", or "estimate severity"). The tasks are split into three categories based on the position in the data pipeline: early tasks, middle tasks and late tasks.'}

## Epiverse-TRACE packages

These are built on methods and analysis that have informed epidemic response to infections including cholera, COVID, dengue, diphtheria, Ebola, influenza, and Zika.

::: {.gradient-rectangle}

[Early tasks]{.task}

[Middle tasks]{.task}

[Late tasks]{.task}

:::

::: {.hex-container}

```{r, results='asis', echo = FALSE}
file.path("_data", "epiverse_pkgs.csv") |>
  read.csv() |>
  as.list() |>
  purrr::transpose() |>
  purrr::map_chr(~ knitr::knit_expand(file = "_templates/hexwall_element.Rmd",
                                      pkgname = .x$pkgname,
                                      description = .x$description)) |>
  cat(sep = "\n")
```

:::

You want to get involved? Read more about the different ways you can contribute in the [dedicated section](get-involved.qmd)! -->