From 3ece903ff07524a6c2408d677533336158b56567 Mon Sep 17 00:00:00 2001 From: Felipe Marques de Almeida Date: Sat, 17 Feb 2024 11:53:54 +0000 Subject: [PATCH] add param to nextflow schema --- nextflow_schema.json | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/nextflow_schema.json b/nextflow_schema.json index d5c8010f..03af0d57 100644 --- a/nextflow_schema.json +++ b/nextflow_schema.json @@ -21,6 +21,11 @@ "description": "Set the expected genome size (E.g. 5.6m; 1.2g). Required by Canu and Haslr.", "help_text": "It sets the expected genome size of the assembly. It is required by Canu and Haslr assemblers. It is optional for Flye, but highly recommended. E.g. 5.6m; 1.2g." }, + "busco_lineage": { + "type": "string", + "description": "Select a BUSCO lineage for the pipeline to use.", + "help_text": "If blank, bacteria_odb10 will be used. If unsure you can set the param to 'auto' which will tell BUSCO to automatically select the most appropriate one (it takes a little bit more of time and space)." + }, "output": { "type": "string", "description": "The output directory where the results will be saved.",