Unable to reload project with save after changing resource script

[JekSun97]

Tested versions

4.3 stable, 4.4 beta1

System information

Godot v4.3.stable - Windows 10.0.19045 - GLES3 (Compatibility) - Radeon RX 560 Series (Advanced Micro Devices, Inc.; 31.0.14001.45012) - Intel(R) Core(TM) i5-4570 CPU @ 3.20GHz (4 Threads)

Issue description

After changing the custom resource script, it is impossible to reload the project, saving it, the pop-up selection window appears even after selection.

0125.mp4

Steps to reproduce

1. Open MRP
2. Open the resource new_resource.tres and open its script
3. Edit the resource script
4. Reload the project using Project->Reload Current Project
5. The pop-up window will appear again.

Minimal reproduction project (MRP)

bug.zip