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about get transcript.fa from gtf file #117

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siyuyang1013 opened this issue Jun 12, 2023 · 0 comments
Open

about get transcript.fa from gtf file #117

siyuyang1013 opened this issue Jun 12, 2023 · 0 comments

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@siyuyang1013
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Hi,
We want to use gffread software to extract transcript.fa files (to extract exon),
we found that the transcript.fa files obtained using (1) genome.fa and using (2) soft masking with RepeatMasker genome.fa are very different.
What is the cause?

Looking forward to your reply,
Siyu.
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