From 38ca17acccae99a2de8bc504691db5a8573ba784 Mon Sep 17 00:00:00 2001 From: Andreas Klemenz Date: Fri, 5 Jan 2024 13:45:37 +0100 Subject: [PATCH] DOC: Simple example for structure generation moved to "Structure and topology generation". --- docs/tools/index.rst | 1 - docs/{tools => topology}/cutoffs.in | 0 docs/{tools => topology}/ethane.extxyz | 0 docs/topology/index.rst | 1 + docs/{tools => topology}/parameters.in | 0 docs/{tools => topology}/setup_non-reactive_simulations.ipynb | 0 6 files changed, 1 insertion(+), 1 deletion(-) rename docs/{tools => topology}/cutoffs.in (100%) rename docs/{tools => topology}/ethane.extxyz (100%) rename docs/{tools => topology}/parameters.in (100%) rename docs/{tools => topology}/setup_non-reactive_simulations.ipynb (100%) diff --git a/docs/tools/index.rst b/docs/tools/index.rst index 98b5c28c..333278b6 100644 --- a/docs/tools/index.rst +++ b/docs/tools/index.rst @@ -9,4 +9,3 @@ Analysis tools pair_distribution angle_distribution ring_analysis - setup_non-reactive_simulations diff --git a/docs/tools/cutoffs.in b/docs/topology/cutoffs.in similarity index 100% rename from docs/tools/cutoffs.in rename to docs/topology/cutoffs.in diff --git a/docs/tools/ethane.extxyz b/docs/topology/ethane.extxyz similarity index 100% rename from docs/tools/ethane.extxyz rename to docs/topology/ethane.extxyz diff --git a/docs/topology/index.rst b/docs/topology/index.rst index 79d25fc2..b298ed8a 100644 --- a/docs/topology/index.rst +++ b/docs/topology/index.rst @@ -5,4 +5,5 @@ Non-reactive force fields for molecular dynamics simulations typically consist o .. toctree:: + setup_non-reactive_simulations topology_building_aC diff --git a/docs/tools/parameters.in b/docs/topology/parameters.in similarity index 100% rename from docs/tools/parameters.in rename to docs/topology/parameters.in diff --git a/docs/tools/setup_non-reactive_simulations.ipynb b/docs/topology/setup_non-reactive_simulations.ipynb similarity index 100% rename from docs/tools/setup_non-reactive_simulations.ipynb rename to docs/topology/setup_non-reactive_simulations.ipynb