From 13eecce6b58f0b9d2d4263d18a143ba3504f83ae Mon Sep 17 00:00:00 2001 From: Metehan Sever Date: Wed, 6 Nov 2024 11:15:55 +0100 Subject: [PATCH] Add qvalue package --- .github/workflows/daily-component-tests-and-migrations.yaml | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/.github/workflows/daily-component-tests-and-migrations.yaml b/.github/workflows/daily-component-tests-and-migrations.yaml index 4a02dc8ec..ea0813831 100644 --- a/.github/workflows/daily-component-tests-and-migrations.yaml +++ b/.github/workflows/daily-component-tests-and-migrations.yaml @@ -21,6 +21,10 @@ jobs: activate-environment: anvio_env environment-file: .conda/environment.yaml python-version: ${{ matrix.python-version }} + - name: "Install Bioconductor qvalue package for R" + shell: bash -l {0} + run: | + Rscript -e 'install.packages("BiocManager", repos="https://cran.rstudio.com"); BiocManager::install("qvalue")' - name: "Conda environment summary" shell: bash -l {0} run: |