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Show homepage viewer counts dynamically for bigquery, cellxgene and others #677

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inodb opened this issue Sep 24, 2024 · 1 comment · May be fixed by #714
Open
2 tasks

Show homepage viewer counts dynamically for bigquery, cellxgene and others #677

inodb opened this issue Sep 24, 2024 · 1 comment · May be fixed by #714
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@inodb
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inodb commented Sep 24, 2024

image BigQuery count is incorrect atm (there aren't any bigquery links after clicking on the icon in the MSK row)

Note that there should be bigquery data for MSK, so looks like that is a separate issue. Follow up items:

  • Show dynamic counts for bigquery, cellxgene and others (same as how it works for the viewers filter)
  • Figure out why MSK's single cell data has no corresponding bigquery link
@inodb inodb added the bug Something isn't working label Sep 24, 2024
@onursumer onursumer linked a pull request Nov 11, 2024 that will close this issue
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There are actually 11 MSK files in the BigQuery mappings file.

"syn51297089": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_combined_samples_current/",
"syn51301557": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_Myeloid_SCLC_samples_only_current/",
"syn51301558": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_NSCLC_epithelial_cells_current/",
"syn51301554": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_Mesenchymal_cells_current/",
"syn51301559": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_RU1215_epithelial_cells_current/",
"syn51614056": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_epithelial_cells_current/",
"syn51298602": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_immune_cells_current/",
"syn51301560": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_myeloid_cells_current/",
"syn51301561": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_immune_cells_current/",
"syn51301567": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_SCLC_tcell_current/",
"syn51297881": "https://bq-search.isb-cgc.org/search?status=current&projectId=isb-cgc-bq&datasetId=HTAN&tableId=scRNAseq_MSK_epithelial_cells_current/",

However, these files cannot be found on the files tab. Somehow these must be filtered out during the release process (or post process).

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