bbmap/bbduk sometimes fails to create the versions.yml file

[mantisps]

Have you checked the docs?

• nf-core website: troubleshooting
• nf-core modules documentation

Description of the bug

Sometimes, when using the module, it does not capture the version number correctly, and instead captures more than one line of the bbversion.sh command, which causes the following error:

I solved it by modifying the versions.yml line from this:
bbmap: \$(bbversion.sh | grep -v "Duplicate cpuset")

to this:
bbmap: \$(bbversion.sh | grep -v "]")

The updated grep discards all the lines that do not correspond to the version number.

Command used and terminal output

Relevant files

No response

System information

Nextflow version 23.10.1
Hardware: HPC
Executor: Slurm
Container: Singularity
OS: Linux