diff --git a/README.md b/README.md index 142fc2f..d0c71e5 100644 --- a/README.md +++ b/README.md @@ -19,6 +19,13 @@ LLMSemanticAnnotator employs Semantic Textual Similarity (STS) to annotate scien This approach aims to significantly enrich the metadata of scientific articles, thereby facilitating experimental reproducibility, comparative analysis of studies, and large-scale knowledge extraction in the field of plant biology. +## Install + +```bash +pip install git+https://github.com/p2m2/encoder-ontology-match-abstract.git@alpha-20241031 +``` + +check [versions](https://github.com/p2m2/encoder-ontology-match-abstract/tags) available ## Run @@ -140,8 +147,8 @@ Configures fetching abstracts from local files. ```bash python3 -m venv llm_semantic_annotator_env -pip install -r requirements.txt source llm_semantic_annotator_env/bin/activate +pip install -r requirements.txt python -m unittest discover ``` @@ -149,8 +156,8 @@ Run a specific test file ```bash python3 -m venv llm_semantic_annotator_env -pip install -r requirements.txt source llm_semantic_annotator_env/bin/activate +pip install -r requirements.txt python -m unittest tests/similarity/test_model_embedding_manager.py ``` @@ -158,7 +165,7 @@ python -m unittest tests/similarity/test_model_embedding_manager.py ```bash python3 -m venv llm_semantic_annotator_env -pip install -r requirements.txt source llm_semantic_annotator_env/bin/activate +pip install -r requirements.txt python -m llm_semantic_annotator.similarity_evaluator ``` \ No newline at end of file