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duo-edit.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/duo.owl#"
xml:base="http://purl.obolibrary.org/obo/duo.owl"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:dcterms="dcterms:"
xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/duo.owl">
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Cooper Stansbury</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">David An</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Dylan Spalding</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Giselle Kerry</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Gregory Rushton</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">J. Neil Otte</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Moran Ncabili</dc:contributor>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Stephanie Dyke</dc:contributor>
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Melanie Courtot</dc:creator>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/DUO_0000041 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/DUO_0000041">
<rdfs:label xml:lang="en">DUO_preferred_label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#id -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id"/>
<!-- http://www.geneontology.org/formats/oboInOwl#shorthand -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#shorthand"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/DUO_0000010 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/DUO_0000010">
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">is_restricted_to</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A is restricted to B iff A is a consent code and B is an investigation and A may only participate in instances of a class C, of which B is an instance.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">J. Neil Otte</obo:IAO_0000117>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">E.g. A dataset is restricted to an instance of an investigation for a specific disease or at geographical location.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000010</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">is restricted to</rdfs:label>
</owl:ObjectProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/DOID_4 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DOID_4">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000016"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism. [url:http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf ]</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DOID:4</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000001 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000001">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000027"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">data use limitation</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A data item that is used to indicate consent permissions for datasets and/or materials, and relates to the purposes for which datasets and/or material might be removed, stored or used.</obo:IAO_0000115>
<obo:IAO_0000118 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">consent code</obo:IAO_0000118>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000001</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">data use limitation</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000002 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000002">
<rdfs:subClassOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A categorical data item indicating the primary category the consent code belongs to according to Dyke et al. 2016.</obo:IAO_0000115>
<obo:IAO_0000231 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This term was depreacted as it is not used to tag datasets but instead as patterns for DUO codes capture. This is an archive specific requirement, e.g. "one code from a primary category and one or more from a second category'
This is better done by Schemablocks and constraining the pattern of usage of DUO terms at each archive level.</obo:IAO_0000231>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000002</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete consent code primary category</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000003 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000003">
<rdfs:subClassOf rdf:resource="http://www.geneontology.org/formats/oboInOwl#ObsoleteClass"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A categorical data item indicating the secondary category the consent code belongs to according to Dyke et al. 2016.</obo:IAO_0000115>
<obo:IAO_0000231 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This term was depreacted as it is not used to tag datasets but instead as patterns for DUO codes capture. This is an archive specific requirement, e.g. "one code from a primary category and one or more from a second category'
This is better done by Schemablocks and constraining the pattern of usage of DUO terms at each archive level.</obo:IAO_0000231>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000003</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">obsolete consent code secondary category</rdfs:label>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000004 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000004">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000001"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">no restriction</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates there is no restriction on use.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000004</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">NRES</oboInOwl:shorthand>
<rdfs:comment>20180907, Meeting Moran Melanie: This is to be thought about more carefully - what is the intent when using 'no restriction' as usually users still need to be researchers.</rdfs:comment>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Note: the NRES alternative term may be confusing as in the UK it also stands for National Research Ethics Service</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">no restriction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000005 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000005">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000042"/>
<obo:DUO_0000041>general research use and clinical care</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is allowed for health/medical/biomedical purposes and other biological research, including the study of population origins or ancestry.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000005</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GRU-CC</oboInOwl:shorthand>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This term includes clinical care, which was not defined in the original consent codes paper. This term does not have a usage in our current use cases and we recommend using DUO:0000042, General Research Use, instead</rdfs:comment>
<rdfs:label>general research use and clinical care</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000006 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000006">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000042"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">health/medical/biomedical research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000006</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">HMB</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">health or medical or biomedical research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000007 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000007">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000006"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/DUO_0000010"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/DOID_4"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease-specific research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is allowed provided it is related to the specified disease.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000007</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DS</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">This term should be coupled with a term describing a disease from an ontology, such as the Disease Ontology, HPO, MonDO to specify the disease the restriction applies to.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease specific research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000011 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000011">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000042"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">population origins or ancestry research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use of the data is limited to the study of population origins or ancestry.</obo:IAO_0000115>
<obo:IAO_0000118 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">population origins/ancestry research</obo:IAO_0000118>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000011</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">POA</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">population origins or ancestry research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000012 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000012">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000001"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/DUO_0000010"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/topic_0003"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">research-specific restrictions</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is limited to studies of a certain research type.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000012</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">RS</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">research specific restrictions</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000014 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000014">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000001"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">research use only</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000014</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">RU</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">research use only</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000015 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000015">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000001"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">no general methods research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use includes methods development research(e.g., development of software or algorithms) only within the bounds of other use limitations.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000015</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">no general methods research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000016 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000016">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000001"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">genetic studies only</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is limited to genetic studies only (i.e., no phenotype-only research)</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000016</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GSO</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">genetic studies only</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000017 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000017">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000027"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">data use requirements</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Requirements indicate additional conditions set for use.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000017</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">data use requirements</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000018 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000018">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">not-for-profit use only</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.</obo:IAO_0000115>
<obo:IAO_0000118 xml:lang="en">non-commercial use</obo:IAO_0000118>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000018</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">NPU</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">not for profit use only</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000019 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000019">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">publication required</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that requestor agrees to make results of studies using the data available to the larger scientific community.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000019</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PUB</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">publication required</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000020 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000020">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">collaboration required</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that the requestor must agree to collaboration with the primary study investigator(s).</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000020</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">COL</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">This could be coupled with a string describing the primary study investigator(s).</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">collaboration required</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000021 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000021">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ethics approval required</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that the requestor must provide documentation of local IRB/ERB approval.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000021</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">IRB</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ethics approval required</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000022 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000022">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/DUO_0000010"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/GAZ_00000448"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">geographical restriction</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that use is limited to within a specific geographic region.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000022</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GS</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">This should be coupled with an ontology term describing the geographical location the restriction applies to.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">geographical restriction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000024 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000024">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">publication moratorium</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that requestor agrees not to publish results of studies until a specific date</obo:IAO_0000115>
<obo:IAO_0000118 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">publication embargo</obo:IAO_0000118>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000024</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MOR</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">This should be coupled with a date specified as ISO8601</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">publication moratorium</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000025 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000025">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">time limit on use</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that use is approved for a specific number of months.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000025</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">TS</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">This should be coupled with an integer value indicating the number of months.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">time limit on use</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000026 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">user-specific restriction</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that use is limited to use by approved users.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000026</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">US</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">user specific restriction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000027 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000027">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">project-specific restriction</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that use is limited to use within an approved project.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000027</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PS</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">project specific restriction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000028 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000028">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">institution-specific restriction</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that use is limited to use within an approved institution.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000028</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">IS</oboInOwl:shorthand>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">institution specific restriction</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000029 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000029">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000017"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">return to database/resource</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This requirement indicates that the requestor must return derived/enriched data to the database/resource.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000029</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">RTN</oboInOwl:shorthand>
<rdfs:label xml:lang="en">return to database or resource</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000031 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000031">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">method development</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning development of methods, algorithms, software or analytical tools.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000031</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">method development</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000032 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000032">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">population research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning a specific population group.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000032</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Should be paired with the an ontology term representing this population (e.g., xxx).</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">population research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000033 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000033">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ancestry research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning ancestry or population origins.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000033</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ancestry research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000034 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000034">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">age category research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning specific age categories.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000034</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Should be paired with the an ontology term representing this population (e.g., xxx).</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">age category research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000035 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000035">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">gender category research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning specific gender categories.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000035</oboInOwl:id>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Should be paired with the an ontology term representing this population (e.g., xxx).</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">gender category research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000036 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000036">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">research control</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning use of data as reference or control material.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000036</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">research control</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000037 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000037">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000066"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">biomedical research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An investigation concerning health, medical, or biomedical research.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000037</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">biomedical research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000038 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000038">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000037"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">genetic research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Biomedical research concerning genetics (i.e., the study of genes, genetic variations and heredity).</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000038</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">genetic research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000039 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000039">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000037"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">drug development research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Biomedical research concerning drug development.</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000039</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">drug development research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000040 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000040">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000037"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease category research</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Biomedical research research concerning specific disease/s</obo:IAO_0000115>
<obo:IAO_0000232 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This definition is a placeholder as a result of meetings at ICBO2018.</obo:IAO_0000232>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000040</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease category research</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/DUO_0000042 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/DUO_0000042">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/DUO_0000001"/>
<obo:DUO_0000041 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">general research use</obo:DUO_0000041>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This data use limitation indicates that use is allowed for general research use for any research purpose.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DUO:0000042</oboInOwl:id>
<oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GRU</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">This includes but is not limited to: health/medical/biomedical purposes, fundamental biology research, the study of population origins or ancestry, statistical methods and algorithms development, and social-sciences research.</rdfs:comment>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">general research use</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/GAZ_00000448 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/GAZ_00000448">
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GAZ:00000448</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">geographic location</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000027 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000027"/>
<!-- http://purl.obolibrary.org/obo/IAO_0000030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000030"/>
<!-- http://purl.obolibrary.org/obo/OBI_0000066 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000066"/>
<!-- http://purl.obolibrary.org/obo/topic_0003 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/topic_0003">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A category denoting a rather broad domain or field of interest, study, application, work, data, or technology. Topics have no clearly defined borders between each other.</obo:IAO_0000115>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">topic:0003</oboInOwl:id>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Topic</rdfs:label>
</owl:Class>
</rdf:RDF>
<!-- Generated by the OWL API (version 4.5.9.2019-02-01T07:24:44Z) https://github.com/owlcs/owlapi -->