shar v2.0.0

• Using terra instead of raster
• Adding pack_randomized() and unpack_randomized() due to terra saving behavior
• Naming raster values "layer"

shar v1.3.2

• Improvements
  • Improvement of classify_habitats() to be more variable
  • Adding breaks argument to results_habitat_association()
  • Adding classint_to_vector() helper function
  • Include new spatstat package structure

shar 1.3.1

shar 1.3.1

• Improvements
  • Bugfix in plot.rd_pat() and plot.rd_mar()
  • Adding internal sample_randomized() function used during plotting

shar v1.3

shar 1.3

• Improvements
  • Better documentation
  • Combine reconstruct_pattern_homo(), reconstruct_pattern_cluster(), and reconstruct_pattern_hetero() to reconstruct_pattern()
  • Replaced plot_randomized_*() function with generic plot() methods
  • Adding warnings and errors if NA values are present
• New functionality
  • list_to_randomized() function
  • Parallelization article
• Adding JOSS paper as reference

shar: A R package to analyze species-habitat associations using point pattern analysis

JOSS Publication

Release for Journal of Open Source Software Publication. For the review process, please see openjournals/joss-reviews#3811.

Citation

Hesselbarth, M.H.K., (2021). shar: A R package to analyze species-habitat associations using point pattern analysis. Journal of Open Source Software, 6(67), 3811. https://doi.org/10.21105/joss.03811

shar v1.2.1

shar 1.2.1

• Improvements
  • reconstruct_pattern_homo() has arguments to specify number of points and window
  • reconstruct_pattern_marks() allows to have different number of points for pattern and marked_pattern argument

shar 1.2

shar 1.2

• Improvements
  • Include new spatstat package structure
  • Use GPL3 License

shar v1.0.1

shar 1.0.1

• Improvements
  • No calculation of energy for printig (too slow)

shar v1.0

shar 1.0

• Improvements
  • Printing methods for most objects
  • Possibility to specify intervals of r for all reconstruction functions
• New functionality
  • plot_energy() to plot energy over iterations for reconstructed patterns
  • reconstruct_pattern_hetero() allows to reconstruct heterogeneous patterns
• Renameing/Structure
  • reconstruct_pattern() was split to three functions: reconstruct_pattern_homo(), reconstruct_pattern_hetero(), reconstruct_pattern_cluster(),
  • reconstruct_marks() is now called reconstruct_pattern_marks()

shar v0.5

shar 0.5

• Improvements
  • Annealing probability can be specified for reconstruction