From 4964ec1ac00ebfc149ac6e846aa25326a02d19a4 Mon Sep 17 00:00:00 2001 From: Dirk Eddelbuettel Date: Fri, 8 Mar 2024 11:57:54 -0600 Subject: [PATCH] Turn trace back of, do not include carrow in cli --- apis/r/tests/testthat/test-SCEOutgest.R | 4 ++-- libtiledbsoma/src/cli/cli.cc | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/apis/r/tests/testthat/test-SCEOutgest.R b/apis/r/tests/testthat/test-SCEOutgest.R index eb9658e5de..4dbd6838d3 100644 --- a/apis/r/tests/testthat/test-SCEOutgest.R +++ b/apis/r/tests/testthat/test-SCEOutgest.R @@ -1,5 +1,5 @@ test_that("Load SCE object from ExperimentQuery mechanics", { - if (Sys.getenv("GITHUB_ACTION") != "") set_log_level("trace") + #if (Sys.getenv("GITHUB_ACTION") != "") set_log_level("trace") skip_if(!extended_tests() || covr_tests()) skip_if_not_installed('SingleCellExperiment', .MINIMUM_SCE_VERSION('c')) uri <- withr::local_tempdir("sce-experiment-query-whole") @@ -359,5 +359,5 @@ test_that("Load SCE object from indexed ExperimentQuery", { ) expect_identical(SingleCellExperiment::colPairNames(obj), 'connectivities') expect_identical(SingleCellExperiment::rowPairNames(obj), 'network') - if (Sys.getenv("GITHUB_ACTION") != "") set_log_level("warn") + #if (Sys.getenv("GITHUB_ACTION") != "") set_log_level("warn") }) diff --git a/libtiledbsoma/src/cli/cli.cc b/libtiledbsoma/src/cli/cli.cc index b0eabc788c..20300508cd 100644 --- a/libtiledbsoma/src/cli/cli.cc +++ b/libtiledbsoma/src/cli/cli.cc @@ -33,7 +33,7 @@ #include "soma/enums.h" #include "soma/soma_array.h" #include "utils/arrow_adapter.h" -#include "utils/carrow.h" +//#include "utils/carrow.h" #include "utils/logger.h" using namespace tiledbsoma;