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Spades finished abnormally, OS return value: 21 #163

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SebastianBechara opened this issue Feb 16, 2022 · 0 comments
Open

Spades finished abnormally, OS return value: 21 #163

SebastianBechara opened this issue Feb 16, 2022 · 0 comments

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@SebastianBechara
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SebastianBechara commented Feb 16, 2022 •
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Hi,
I might have missed this issue if someone already ran into it. If that's the case I'm sorry for bothering.

I was trying to run the test example for this pipeline.
It uses Spades as assembler with following parameters:

spades.py -k 21,33,55,77,99,127 -o out_dir -1 mate1.fq -2 mate2.fq

It runs into the following issue:
finished abnormally, OS return value: 21

There are the log file and the parameter file:
params.txt
spades.log

Thanks for the help!
Sebastian
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@SebastianBechara