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EC confidence threshold #52

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ZhuLvs opened this issue Oct 16, 2024 · 1 comment
Open

EC confidence threshold #52

ZhuLvs opened this issue Oct 16, 2024 · 1 comment

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@ZhuLvs
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ZhuLvs commented Oct 16, 2024

Dear Author,

Thank you for your outstanding work on CLEAN. In my current research, I am attempting to design enzyme proteins from scratch and using CLEAN to predict EC numbers. At what confidence threshold would you recommend further experimental validation of the predicted sequences? Additionally, I have noticed that in my design process, when CLEAN predicts an EC number with a confidence score greater than 0.8, the corresponding sequences often have low final pLDDT scores when predicted using AF3.

@ZhuLvs
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ZhuLvs commented Oct 16, 2024

I am using the quick-start version and the web version.

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