From 23f3319f05efeced22dd94318fe673c591414583 Mon Sep 17 00:00:00 2001
From: yilin xu <yilinxu@yilins-MacBook-Air.local>
Date: Mon, 18 Jan 2021 18:07:39 -0600
Subject: [PATCH] use updated clade file

---
 config/clades.tsv | 60 +++++++++++++++++++++++++++++++++++++++++++++--
 1 file changed, 58 insertions(+), 2 deletions(-)

diff --git a/config/clades.tsv b/config/clades.tsv
index 3b0dda7..590e852 100644
--- a/config/clades.tsv
+++ b/config/clades.tsv
@@ -1,18 +1,74 @@
 clade	gene	site	alt
+
 19A	nuc	8782	C
-19A 	nuc	14408	C
+19A	nuc	14408	C
+
 19B	nuc	8782	T
 19B	nuc	28144	C
+
 20A	nuc	8782	C
 20A	nuc	14408	T
 20A	nuc	23403	G
+
 20B	nuc	8782	C
 20B	nuc	14408	T
 20B	nuc	23403	G
 20B	nuc	28881	A
 20B	nuc	28882	A
+
 20C	nuc	1059	T
 20C	nuc	8782	C
 20C	nuc	14408	T
 20C	nuc	23403	G
-20C	nuc	25563	T
\ No newline at end of file
+20C	nuc	25563	T
+
+20D	nuc	4002	T
+20D	nuc	10097	A
+20D	nuc	13536	T
+20D	nuc	23731	T
+
+20E (EU1)	nuc	8782	C
+20E (EU1)	nuc	14408	T
+20E (EU1)	nuc	23403	G
+20E (EU1)	nuc	22227	T
+20E (EU1)	nuc	28932	T
+20E (EU1)	nuc	29645	T
+
+20F	nuc	1163	T
+20F	nuc	7540	C
+20F	nuc	16647	T
+20F	nuc	18555	T
+20F	nuc	22992	A
+20F	nuc	23401	A
+
+20G	nuc	10319	T
+20G	nuc	18424	G
+20G	nuc	21304	T
+20G	nuc	25907	T
+20G	nuc	27964	T
+20G	nuc	28472	T
+20G	nuc	28869	T
+
+20H/501Y.V2	nuc	1059	T
+20H/501Y.V2	nuc	8782	C
+20H/501Y.V2	nuc	14408	T
+20H/501Y.V2	nuc	23403	G
+20H/501Y.V2	nuc	25563	T
+20H/501Y.V2	nuc	23063	T
+20H/501Y.V2	nuc	23012	A
+
+20I/501Y.V1	nuc	8782	C
+20I/501Y.V1	nuc	14408	T
+20I/501Y.V1	nuc	23403	G
+20I/501Y.V1	nuc	28881	A
+20I/501Y.V1	nuc	28882	A
+20I/501Y.V1	nuc	23063	T
+20I/501Y.V1	nuc	14676	T
+20I/501Y.V1	nuc	15279	T
+
+20J/501Y.V3	nuc	733	C
+20J/501Y.V3	nuc	2749	T
+20J/501Y.V3	nuc	3828	T
+20J/501Y.V3	nuc	5648	C
+20J/501Y.V3	nuc	12778	T
+20J/501Y.V3	nuc	13860	T