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DESCRIPTION
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Package: BugSigDBEnrich
Type: Package
Title: A shiny app for BugSigDB
Version: 0.99.28
Authors@R:
c(
person(
given = "Samuel", family = "Gamboa", role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-6863-7943")
),
person(
given = "Levi", family = "Waldron", role = c("aut"),
comment = c(ORCID = "0000-0003-2725-0694")
)
)
Description:
The BugSigDBEnrich app allows the comparison of a list of microbes with
BugSigDB, a manually curated database of microbial signatures from published
studies. It also enables comparisons with Bugphyzz, which provides
annotations of physiological and other phenotipic bacterial traits.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Imports:
bsicons,
bslib,
bugphyzz,
bugsigdbr,
BugSigDBStats,
cacheTaxonomizr,
dplyr,
DT,
htmltools,
htmlwidgets,
markdown,
ontologySimilarity,
purrr,
rlang,
shiny,
shinythemes,
shinyWidgets,
stringr,
taxonomizr,
tools,
utils,
waiter
Remotes:
sdgamboa/cacheTaxonomizr@devel,
waldronlab/BugSigDBStats@main
RoxygenNote: 7.3.2
URL: https://github.com/waldronlab/BugSigDBEnrich
BugReports: https://github.com/waldronlab/BugSigDBEnrich/issues
Depends:
R (>= 4.4)