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Snakelike dependency Pulp, causing backward compatibility issues #169

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henrykironde opened this issue Jan 12, 2024 · 0 comments
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@henrykironde
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A new version of pulp was released 2.7.0

This breaks due to changes of list_solvers to listSolvers and get_solver to getSolver.

Traceback (most recent call last):
  File ".conda/envs/EvergladesTools/lib/python3.11/site-packages/snakemake/cli.py", line 2037, in main
    parser, args = parse_args(argv)
                   ^^^^^^^^^^^^^^^^
  File "conda/envs/EvergladesTools/lib/python3.11/site-packages/snakemake/cli.py", line 1629, in parse_args
    parser = get_argument_parser()
             ^^^^^^^^^^^^^^^^^^^^^
  File ".conda/envs/EvergladesTools/lib/python3.11/site-packages/snakemake/cli.py", line 770, in get_argument_parser
    lp_solvers = pulp.list_solvers(onlyAvailable=True)
                 ^^^^^^^^^^^^^^^^^
AttributeError: module 'pulp' has no attribute 'list_solvers
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