diff --git a/viewer/squonk/day-1-job-override.json b/viewer/squonk/day-1-job-override.json index 0cae59aa..c4836b0c 100644 --- a/viewer/squonk/day-1-job-override.json +++ b/viewer/squonk/day-1-job-override.json @@ -15,16 +15,22 @@ "uniqueItems": true, "format": "chemical/x-mdl-molfile", "items": { - "from": "lhs", - "enum": "{inputs_dir}/{target}-{item}.mol", + "from": { + "side": "lhs", + "file" : "ligand_mol" + }, + "enum": "{inputs_dir}/{item}", "enumNames": "{item}" } }, "protein": { "type": "string", "format": "chemical/x-pdb", - "from": "lhs", - "enum": "{inputs_dir}/{target}-{item}_apo-desolv.pdb", + "from": { + "side": "lhs", + "file" : "apo_desolv_file" + }, + "enum": "{inputs_dir}/{item}", "enumNames": "{item}" } },