Workcell manager

.devcontainer/DevContainer.Dockerfile

@@ -1,6 +1,6 @@
-# Note: You can use any Debian/Ubuntu based image you want.
-FROM mcr.microsoft.com/devcontainers/base:bullseye
-
-# [Optional] Uncomment this section to install additional OS packages.
-RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
-    && apt-get -y install --no-install-recommends vim
+# Note: You can use any Debian/Ubuntu based image you want.
+FROM mcr.microsoft.com/devcontainers/base:bullseye
+
+# [Optional] Uncomment this section to install additional OS packages.
+RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
+    && apt-get -y install --no-install-recommends vim

.devcontainer/devcontainer.compose.yaml

@@ -1,24 +1,24 @@
-services:
-  dev:
-    build:
-      context: .
-      dockerfile: DevContainer.Dockerfile
-
-    volumes:
-      # Forwards the local Docker socket to the container.
-      - /var/run/docker.sock:/var/run/docker-host.sock
-      # Update this to wherever you want VS Code to mount the folder of your project
-      - ../..:/workspaces:cached
-
-    # Overrides default command so things don't shut down after the process ends.
-    entrypoint: /usr/local/share/docker-init.sh
-    command: sleep infinity
-
-    # Uncomment the next four lines if you will use a ptrace-based debuggers like C++, Go, and Rust.
-    # cap_add:
-    #  - SYS_PTRACE
-    # security_opt:
-    #   - seccomp:unconfined
-
-    # Use "forwardPorts" in **devcontainer.json** to forward an app port locally.
-    # (Adding the "ports" property to this file will not forward from a Codespace.)
+services:
+  dev:
+    build:
+      context: .
+      dockerfile: DevContainer.Dockerfile
+
+    volumes:
+      # Forwards the local Docker socket to the container.
+      - /var/run/docker.sock:/var/run/docker-host.sock
+      # Update this to wherever you want VS Code to mount the folder of your project
+      - ../..:/workspaces:cached
+
+    # Overrides default command so things don't shut down after the process ends.
+    entrypoint: /usr/local/share/docker-init.sh
+    command: sleep infinity
+
+    # Uncomment the next four lines if you will use a ptrace-based debuggers like C++, Go, and Rust.
+    # cap_add:
+    #  - SYS_PTRACE
+    # security_opt:
+    #   - seccomp:unconfined
+
+    # Use "forwardPorts" in **devcontainer.json** to forward an app port locally.
+    # (Adding the "ports" property to this file will not forward from a Codespace.)

.devcontainer/devcontainer.json

@@ -1,53 +1,53 @@
-{
-// For format details, see https://aka.ms/devcontainer.json. For config options, see the
-// README at: https://github.com/devcontainers/templates/tree/main/src/docker-outside-of-docker-compose
-	"name": "MADSci Dev Container",
-	"dockerComposeFile": "devcontainer.compose.yaml",
-	"service": "dev",
-	"workspaceFolder": "/workspaces/${localWorkspaceFolderBasename}",
-
-	// Use this environment variable if you need to bind mount your local source code into a new container.
-	"remoteEnv": {
-		"LOCAL_WORKSPACE_FOLDER": "${localWorkspaceFolder}"
-	},
-
-	"customizations": {
-		"vscode": {
-			"extensions": [
-				"ms-python.python",
-				"donjayamanne.python-environment-manager",
-				"charliermarsh.ruff",
-				"VisualStudioExptTeam.vscodeintellicode",
-				"aaron-bond.better-comments",
-				"vuetifyjs.vuetify-vscode",
-				"christian-kohler.path-intellisense",
-				"nefrob.vscode-just",
-				"Vue.volar",
-				"redhat.vscode-yaml",
-				"KevinRose.vsc-python-indent",
-				"ms-python.vscode-pylance",
-				"ms-toolsai.jupyter"
-			]
-		}
-	},
-
-	"features": {
-		"ghcr.io/devcontainers/features/docker-outside-of-docker:1": {},
-		"ghcr.io/devcontainers/features/python:1": {},
-		"ghcr.io/guiyomh/features/just:0": {},
-		"ghcr.io/devcontainers-extra/features/act:1": {},
-		"ghcr.io/devcontainers-extra/features/actionlint:1": {},
-		"ghcr.io/devcontainers-extra/features/pdm:2": {},
-		"ghcr.io/devcontainers-extra/features/vue-cli:2": {},
-		"ghcr.io/devcontainers-extra/features/pre-commit:2": {},
-		"ghcr.io/devcontainers-extra/features/ruff:1": {}
-	},
-	// Use 'forwardPorts' to make a list of ports inside the container available locally.
-	// "forwardPorts": [8000],
-
-	// Use 'postCreateCommand' to run commands after the container is created.
-	"postCreateCommand": "just init"
-
-	// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
-	// "remoteUser": "root"
-}
+{
+// For format details, see https://aka.ms/devcontainer.json. For config options, see the
+// README at: https://github.com/devcontainers/templates/tree/main/src/docker-outside-of-docker-compose
+	"name": "MADSci Dev Container",
+	"dockerComposeFile": "devcontainer.compose.yaml",
+	"service": "dev",
+	"workspaceFolder": "/workspaces/${localWorkspaceFolderBasename}",
+
+	// Use this environment variable if you need to bind mount your local source code into a new container.
+	"remoteEnv": {
+		"LOCAL_WORKSPACE_FOLDER": "${localWorkspaceFolder}"
+	},
+
+	"customizations": {
+		"vscode": {
+			"extensions": [
+				"ms-python.python",
+				"donjayamanne.python-environment-manager",
+				"charliermarsh.ruff",
+				"VisualStudioExptTeam.vscodeintellicode",
+				"aaron-bond.better-comments",
+				// "vuetifyjs.vuetify-vscode",
+				"christian-kohler.path-intellisense",
+				"nefrob.vscode-just",
+				// "Vue.volar",
+				"redhat.vscode-yaml",
+				"KevinRose.vsc-python-indent",
+				"ms-python.vscode-pylance",
+				"ms-toolsai.jupyter"
+			]
+		}
+	},
+
+	"features": {
+		"ghcr.io/devcontainers/features/docker-outside-of-docker:1": {},
+		"ghcr.io/devcontainers/features/python:1": {},
+		"ghcr.io/guiyomh/features/just:0": {},
+		"ghcr.io/devcontainers-extra/features/act:1": {},
+		"ghcr.io/devcontainers-extra/features/actionlint:1": {},
+		"ghcr.io/devcontainers-extra/features/pdm:2": {},
+		// "ghcr.io/devcontainers-extra/features/vue-cli:2": {},
+		"ghcr.io/devcontainers-extra/features/pre-commit:2": {},
+		"ghcr.io/devcontainers-extra/features/ruff:1": {}
+	},
+	// Use 'forwardPorts' to make a list of ports inside the container available locally.
+	// "forwardPorts": [8000],
+
+	// Use 'postCreateCommand' to run commands after the container is created.
+	"postCreateCommand": "just init"
+
+	// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
+	// "remoteUser": "root"
+}

.dockerignore

@@ -1 +1 @@
-**/node_modules
+**/node_modules

.github/dependabot.yml

@@ -1,12 +1,12 @@
-# To get started with Dependabot version updates, you'll need to specify which
-# package ecosystems to update and where the package manifests are located.
-# Please see the documentation for more information:
-# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
-# https://containers.dev/guide/dependabot
-
-version: 2
-updates:
- - package-ecosystem: "devcontainers"
-   directory: "/"
-   schedule:
-     interval: weekly
+# To get started with Dependabot version updates, you'll need to specify which
+# package ecosystems to update and where the package manifests are located.
+# Please see the documentation for more information:
+# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
+# https://containers.dev/guide/dependabot
+
+version: 2
+updates:
+ - package-ecosystem: "devcontainers"
+   directory: "/"
+   schedule:
+     interval: weekly

.justfile

@@ -1,41 +1,41 @@
-# List available commands
-default:
-  @just --list --justfile {{justfile()}}
-
-# initialize the project
-init: hooks
-  @which pdm || echo "pdm not found, you'll need to install it: https://github.com/pdm-project/pdm"
-  @pdm install
-  @#test -e .env || cp .env.example .env
-
-# Install the pre-commit hooks
-hooks:
-  @pre-commit install
-
-# Run the pre-commit checks
-checks:
-  @pre-commit run --all-files || { echo "Checking fixes\n" ; pre-commit run --all-files; }
-check: checks
-
-
-# Python tasks
-
-# Update the pdm version
-pdm-update:
-  @pdm self update
-
-# Install the default dependencies
-pdm-install:
-  @pdm install
-
-# Install a specific group of dependencies
-pdm-install-group group:
-  @pdm install --group {{group}}
-
-# Install all dependencies
-pdm-install-all:
-  @just pdm-install-group :all
-
-# Build the python package
-pdm-build:
-  @pdm build
+# List available commands
+default:
+  @just --list --justfile {{justfile()}}
+
+# initialize the project
+init: hooks
+  @which pdm || echo "pdm not found, you'll need to install it: https://github.com/pdm-project/pdm"
+  @pdm install
+  @#test -e .env || cp .env.example .env
+
+# Install the pre-commit hooks
+hooks:
+  @pre-commit install
+
+# Run the pre-commit checks
+checks:
+  @pre-commit run --all-files || { echo "Checking fixes\n" ; pre-commit run --all-files; }
+check: checks
+
+
+# Python tasks
+
+# Update the pdm version
+pdm-update:
+  @pdm self update
+
+# Install the default dependencies
+pdm-install:
+  @pdm install
+
+# Install a specific group of dependencies
+pdm-install-group group:
+  @pdm install --group {{group}}
+
+# Install all dependencies
+pdm-install-all:
+  @just pdm-install-group :all
+
+# Build the python package
+pdm-build:
+  @pdm build

.pre-commit-config.yaml

@@ -1,29 +1,29 @@
-repos:
-  - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v5.0.0
-    hooks:
-      - id: check-yaml
-      - id: check-toml
-      - id: check-ast
-      - id: check-merge-conflict
-      - id: check-added-large-files
-      - id: mixed-line-ending
-      - id: end-of-file-fixer
-      - id: trailing-whitespace
-  - repo: https://github.com/kynan/nbstripout
-    rev: 0.8.1
-    hooks:
-      - id: nbstripout
-  - repo: https://github.com/astral-sh/ruff-pre-commit
-    # Ruff version.
-    rev: v0.8.1
-    hooks:
-      # Run the linter.
-      - id: ruff
-        args: [--fix]
-      # Run the formatter.
-      - id: ruff-format
-  - repo: https://gitlab.com/bmares/check-json5
-    rev: v1.0.0
-    hooks:
-    - id: check-json5
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v5.0.0
+    hooks:
+      - id: check-yaml
+      - id: check-toml
+      - id: check-ast
+      - id: check-merge-conflict
+      - id: check-added-large-files
+      - id: mixed-line-ending
+      - id: end-of-file-fixer
+      - id: trailing-whitespace
+  - repo: https://github.com/kynan/nbstripout
+    rev: 0.8.1
+    hooks:
+      - id: nbstripout
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    # Ruff version.
+    rev: v0.8.1
+    hooks:
+      # Run the linter.
+      - id: ruff
+        args: [--fix]
+      # Run the formatter.
+      - id: ruff-format
+  - repo: https://gitlab.com/bmares/check-json5
+    rev: v1.0.0
+    hooks:
+    - id: check-json5

README.md

@@ -1,17 +1,17 @@
-# Modular Autonomous Discovery for Science (MADSci)
-
-## Overview
-
-MADSci is a modular, autonomous, and scalable framework for scientific discovery and experimentation.
-
-## Components
-
-- [Squid](./src/madsci.squid/README.md): The Workcell Management Engine.
-- [Types](./src/madsci.types/README.md): The Type Definition Library for MADSci.
-- [PyClient](./src/madsci.pyclient/README.md): The Python Client for MADSci.
-- [Module](./src/madsci.module/README.md): The Module Library for integrating devices.
-- [Server](./src/madsci.server/README.md): The REST API Server.
-- [CLI](./src/madsci.cli/README.md): The Command Line Interface.
-- [Dashboard](./src/madsci.dashboard/README.md): The web-based Dashboard and management interface.
-- [Resources](./src/madsci.resources/README.md): The Resource Library for managing resources.
-- [Events](./src/madsci.events/README.md): The Event Library for managing events.
+# Modular Autonomous Discovery for Science (MADSci)
+
+## Overview
+
+MADSci is a modular, autonomous, and scalable framework for scientific discovery and experimentation.
+
+## Components
+
+- [Squid](./src/madsci.squid/README.md): The Workcell Management Engine.
+- [Types](./src/madsci.types/README.md): The Type Definition Library for MADSci.
+- [PyClient](./src/madsci.pyclient/README.md): The Python Client for MADSci.
+- [Module](./src/madsci.module/README.md): The Module Library for integrating devices.
+- [Server](./src/madsci.server/README.md): The REST API Server.
+- [CLI](./src/madsci.cli/README.md): The Command Line Interface.
+- [Dashboard](./src/madsci.dashboard/README.md): The web-based Dashboard and management interface.
+- [Resources](./src/madsci.resources/README.md): The Resource Library for managing resources.
+- [Events](./src/madsci.events/README.md): The Event Library for managing events.

madsci/madsci_client/madsci/client/__init__.py

@@ -1 +1 @@
-"""The Modular Autonomous Discovery for Science (MADSci) Python Client and CLI."""
+"""The Modular Autonomous Discovery for Science (MADSci) Python Client and CLI."""