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BeMoBIL BIDS tools : BIDS2SET

sjeung edited this page May 13, 2022 · 3 revisions

To convert BIDS files to .set...

Conversion of files formatted in BIDS to .set is a step that can be seen as the second part of the importing chain in the BeMoBIL pipeline, where the data is first saved as .xdf, converted to BIDS, and then to .set. Originally the importing process was designed to be a one step thing from .xdf to .set (via mobilab) so this addition may look like a redundant step. However, we see many benefits in including the BIDS stage as an official part of the pipeline and decided to push it forward. For one, it is great that it forces the user to think about and document all the important metadata accompanying the set. Another is that of course we now have the potential of extending the use of the BIDS to .set conversion scripts to reading in MoBI data sets shared by other groups. Lastly, we can now share the data collected within the group with ease.

  • bemobil_bids2set.m
    this is the main function that calls other configuration scripts below

Dependencies

  • SCCN bids-matlab-tools