Skip to content

Commit

Permalink
remove no longer used plot_optimisation settings
Browse files Browse the repository at this point in the history
Change-Id: Id47249d66806e2e3eeaac9a248ecf13cb043c7c9
  • Loading branch information
Jaquier Aurélien Tristan committed Nov 8, 2024
1 parent 229fc3f commit 9fcc909
Showing 1 changed file with 0 additions and 4 deletions.
4 changes: 0 additions & 4 deletions bluepyemodel/emodel_pipeline/emodel_settings.py
Original file line number Diff line number Diff line change
Expand Up @@ -60,7 +60,6 @@ def __init__(
use_stagnation_criterion=True,
validation_function="max_score",
validation_threshold=5.0,
plot_optimisation=True,
use_ProbAMPANMDA_EMS=False,
compile_mechanisms=False,
n_model=3,
Expand Down Expand Up @@ -242,8 +241,6 @@ def __init__(
Nexus access_point and the IC-selector.
n_model (int): minimum number of models to pass validation to consider the e-model
building task done. Only used by the Luigi workflow.
plot_optimisation (bool): should the e-models scores and traces be plotted. Only used
by the Luigi workflow.
use_ProbAMPANMDA_EMS (bool): True to link ProbAMPANMDA_EMS in EMC on nexus,
and download ProbAMPANMDA from nexus along with other mechanisms.
compile_mechanisms (bool): should the mod files be copied in the local
Expand Down Expand Up @@ -433,7 +430,6 @@ def __init__(
self.name_gene_map = name_gene_map

# Settings specific to the analysis (figure plotting)
self.plot_optimisation = plot_optimisation
self.plot_optimisation_progress = plot_optimisation_progress
self.plot_distributions = plot_distributions
self.plot_scores = plot_scores
Expand Down

0 comments on commit 9fcc909

Please sign in to comment.