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rGFA support (experimental)#1186

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glennhickey wants to merge 8 commits intomasterComparativeGenomicsToolkit/cactus:masterfrom rgfa2ComparativeGenomicsToolkit/cactus:rgfa2Copy head branch name to clipboard

+189-34

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Commits on Sep 29, 2023

• add rgfa interface

  glennhickey

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  61dbed5

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Commits on Oct 4, 2023

• flesh out rgfa interface

  glennhickey

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  f34c56b

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Commits on Oct 5, 2023

• update to newer vg

  glennhickey

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  018f618

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Commits on Oct 6, 2023

• update vg

  glennhickey

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  1c39998

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• update vg again

  glennhickey

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  ae6985b

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• 0-haplotypes everywhere

  glennhickey

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  55e2770

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Commits on Nov 21, 2023

• Merge remote-tracking branch 'origin/master' into rgfa2

  glennhickey

  committed
  d30c5c2

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• fix rgfa/vcf option toggle--rgfa only works on backbone

  glennhickey

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  1ba988f

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