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RepeatModeler NINJA config fix
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asgray committed Sep 23, 2024
1 parent b80057a commit 8e319d9
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -188,7 +188,7 @@ RUN cd /opt \
&& perl configure \
-cdhit_dir=/opt/cd-hit -genometools_dir=/opt/genometools/bin \
-ltr_retriever_dir=/opt/LTR_retriever -mafft_dir=/opt/mafft/bin \
-ninja_dir=/opt/NINJA/NINJA -recon_dir=/opt/RECON/bin \
-ninja_dir=/opt/NINJA -recon_dir=/opt/RECON/bin \
-repeatmasker_dir=/opt/RepeatMasker \
-rmblast_dir=/opt/rmblast/bin -rscout_dir=/opt/RepeatScout \
-trf_dir=/opt \
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2 changes: 1 addition & 1 deletion dfam-tetools.sh
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ programs are available, singularity is preferred."

## Parse command-line arguments ##

container="dfam/tetools:1.89.1"
container="dfam/tetools:1.89.2"
use_docker=0
use_singularity=0
use_lib=0
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