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Update pyspi dependencies for python 3.10+ compatibility #70
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This PR brings pyspi to python 3.10+ users by bumping the relevant dependencies such that coverage across all python versions (3.8-3.12) is provided. Pyspi will now run on all platforms and all python versions except for MacOS Python
3.8
.Some of the key changes in order of files changed:
3.8-3.12
.1.1.0
Calculator
object, allowing users to specify whether they want to normalise the data before computing SPIs with the default value set toTrue
. Prior to this, normalisation was carried out by default without explicitly warning the user of this operation.anm_score
function to reshape sklearn's GPRegressor prediction output. See this open PR for more information about the bug in cdt's implementation of additive noise model (ANM
) when used in conjunction withscikit-learn >= 1.1.0
.>= 3.9, <3.10
to>=3.8
.lmfit_SGDRegressor
for reproducibility of outputs.inspect_calc_results
to print a high level summary table of successful SPIs computed, SPIs returning NaNs and number of partial NaNs returned, addressing issue 6. This will run by defaulting after finishing SPI computations.