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Merge pull request #1125 from EnvironmentOntology/issue-1122
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Editing "marine bed", "shoreline", "sea surface layer" - addressing #1122
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@raissameyer
raissameyer authored May 12, 2021
2 parents ecb8f08 + a017f1f commit 413fdb7
Showing 1 changed file with 40 additions and 15 deletions.
55 changes: 40 additions & 15 deletions src/envo/envo-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -10622,11 +10622,11 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000424> <http://purl.obolibrar

# Class: <http://purl.obolibrary.org/obo/ENVO_00000426> (ocean floor)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MA:ma"^^xsd:string) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_00000426> "The solid surface that underlies an ocean."^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://en.wikipedia.org/wiki/Ocean_floor>) Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MA:ma"^^xsd:string) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_00000426> "A marine bed which lies below an ocean."^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000426> "FTT:1020"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000426> "https://en.wikipedia.org/wiki/Ocean_floor"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000426> "ocean bed"^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ADL:FTT"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000426> "ocean floor feature"^^xsd:string)
AnnotationAssertion(Annotation(rdfs:comment "Seas are smaller than oceans and are usually located where the land and ocean meet. However, these two terms are often used interchangeably."@en) <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000426> "seafloor"@en)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_00000426> "ocean floor"^^xsd:string)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000426> <http://purl.obolibrary.org/obo/ENVO_01001378>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000426> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/ENVO_00002450>))
Expand Down Expand Up @@ -11246,12 +11246,21 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000481> ObjectSomeValuesFrom(<

# Class: <http://purl.obolibrary.org/obo/ENVO_00000482> (sea floor)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MA:ma"^^xsd:string) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_00000482> "The ground surface that lies beneath a sea."^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://en.wikipedia.org/wiki/Seabed>) Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "MA:ma"^^xsd:string) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_00000482> "A marine bed which lies below a sea."^^xsd:string)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000482> <https://orcid.org/0000-0002-2996-719X>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000482> <https://orcid.org/0000-0002-8166-0486>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000482> <https://orcid.org/0000-0003-1072-8081>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000482> "EcoLexicon:sea_floor"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000482> "https://en.wikipedia.org/wiki/Sea_floor"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "Meeresboden"@de)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "NASA:earthrealm"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "SeaFloor"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "sea bed"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "sea bottom"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "fondale marino"@it)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "fondo marino"@es)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "seafloor"@en)
AnnotationAssertion(Annotation(rdfs:comment "Seas are smaller than oceans and are usually located where the land and ocean meet. However, these two terms are often used interchangeably."@en) <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "ocean floor"@en)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "sea bed"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "海床"@zh)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000482> "海底"@zh)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <http://purl.obolibrary.org/obo/ENVO_00000482> "envoPlastics"@en)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_00000482> "sea floor"^^xsd:string)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000482> <http://purl.obolibrary.org/obo/ENVO_01001378>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000482> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002220> <http://purl.obolibrary.org/obo/ENVO_00000016>))
Expand Down Expand Up @@ -11304,19 +11313,26 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000485> ObjectSomeValuesFrom(<

# Class: <http://purl.obolibrary.org/obo/ENVO_00000486> (shoreline)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "USGS:SDTS"^^xsd:string) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_00000486> "The line of contact between a body of water and the land."^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "USGS:SDTS"^^xsd:string) Annotation(rdfs:comment <https://en.wikipedia.org/wiki/Shore>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_00000486> "A two-dimensional continuant fiat boundary which is located between a landmass and a water body."^^xsd:string)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000486> <https://orcid.org/0000-0002-2996-719X>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000486> <https://orcid.org/0000-0002-4366-3088>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000486> <https://orcid.org/0000-0002-8166-0486>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_00000486> <https://orcid.org/0000-0003-1072-8081>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000486> "EcoLexicon:shoreline"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000486> "FTT:240"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000486> "FTT:503"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000486> "TGN:21481"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/ENVO_00000486> "https://en.wikipedia.org/wiki/Shoreline"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "Küstenlinie"@de)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "NASA:earthrealm"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "Shoreline"^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "USGS:SDTS"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "coastal shoreline"^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "ADL:FTT"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "coastal zone"^^xsd:string)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "USGS:SDTS"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "coastline"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "linea costiera"@it)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "línea costera"@es)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "海岸線"@zh)
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "Geonames:feature"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "SHOR"^^xsd:string)
AnnotationAssertion(Annotation(<http://purl.obolibrary.org/obo/IAO_0000116> "The distinction between shoreline and coastline needs more thought."@en) Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "USGS:SDTS"^^xsd:string) <http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_00000486> "coastline"^^xsd:string)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <http://purl.obolibrary.org/obo/ENVO_00000486> "envoPlastics"@en)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_00000486> "1) this term is usually used for larger water bodies like lakes and oceans, 2) that the actual spatial extent of a shoreline, and the sharpness of its boundaries, is often arbitrarily or operationally defined, and 3) this term is for the physical shoreline, not the one- or two-dimensional representation of shorelines."@en)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_00000486> "shoreline"^^xsd:string)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000486> <http://purl.obolibrary.org/obo/ENVO_01001784>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000486> <http://purl.obolibrary.org/obo/BFO_0000146>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_00000486> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/ENVO_00000304>))

# Class: <http://purl.obolibrary.org/obo/ENVO_00000487> (paternoster lake)
Expand Down Expand Up @@ -31518,8 +31534,12 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01001377> ObjectSomeValuesFrom(<

# Class: <http://purl.obolibrary.org/obo/ENVO_01001378> (marine bed)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01001378> "A bed which underlies a marine water body.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01001378> "A submerged bed which underlies a marine water body."@en)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_01001378> <https://orcid.org/0000-0002-2996-719X>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_01001378> <https://orcid.org/0000-0002-8166-0486>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_01001378> <https://orcid.org/0000-0003-1072-8081>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#created_by> <http://purl.obolibrary.org/obo/ENVO_01001378> <http://orcid.org/0000-0002-4366-3088>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym> <http://purl.obolibrary.org/obo/ENVO_01001378> "sea bottom"@en)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01001378> "marine bed"@en)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01001378> <http://purl.obolibrary.org/obo/ENVO_00000501>)
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01001378> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002220> <http://purl.obolibrary.org/obo/ENVO_00001999>))
Expand Down Expand Up @@ -33579,11 +33599,16 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01001570> ObjectSomeValuesFrom(<

# Class: <http://purl.obolibrary.org/obo/ENVO_01001581> (sea surface layer)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01001581> "A surface layer of a water body which is part of an ocean or sea.")
AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01001581> "A surface layer which is part of an ocean or sea."@en)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_01001581> <https://orcid.org/0000-0002-2996-719X>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_01001581> <https://orcid.org/0000-0002-8166-0486>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/contributor> <http://purl.obolibrary.org/obo/ENVO_01001581> <https://orcid.org/0000-0003-1072-8081>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#created_by> <http://purl.obolibrary.org/obo/ENVO_01001581> <http://orcid.org/0000-0002-4366-3088>)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#creation_date> <http://purl.obolibrary.org/obo/ENVO_01001581> "2019-03-06T01:22:01Z"^^xsd:dateTime)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <http://purl.obolibrary.org/obo/ENVO_01001581> "envoMarine")
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01001581> "At this level, the depth of this layer is ambiguous. Some methods (telemetry) measure only the first few centimeters of the sea or ocean surface. In situ methods often sample the first few meters. Subclasses can be created for such cases.")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#inSubset> <http://purl.obolibrary.org/obo/ENVO_01001581> "envoPlastics"@en)
AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01001581> "At this level, the depth of this layer is ambiguous. Some methods (telemetry) measure only the first few centimeters of the sea or ocean surface. In situ methods often sample the first few meters. Subclasses can be created for such cases.
Sea surface layer is also used to refer to the surfaces of oceans."@en)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01001581> "sea surface layer"@en)
EquivalentClasses(<http://purl.obolibrary.org/obo/ENVO_01001581> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/ENVO_01001554> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectUnionOf(<http://purl.obolibrary.org/obo/ENVO_00000015> <http://purl.obolibrary.org/obo/ENVO_00000016>))))
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01001581> <http://purl.obolibrary.org/obo/ENVO_01001554>)
Expand Down

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