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Sampling testing, timing and license#6

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fatimadavila wants to merge 12 commits intomainGraylab/MaskedProteinEnT:mainfrom train-extrasGraylab/MaskedProteinEnT:train-extrasCopy head branch name to clipboard

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Commits on Oct 14, 2024

• fixed hardcoded training dataset path to sidechainnet pkl

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• tested and cleaned fine_tune_ppi-abag.sh zenodo dataset might be broken

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• changed to dummy wandb entity

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• minor change to tar line in fine tuning train script. tested and cleaned sample_protein_sequences.sh

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• tested and cleaned sample_antibody_sequences.sh

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• tested and cleaned

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• tested and cleaned

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• changed utils.plotting import in AntibodySequenceSampler.py

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Commits on Oct 15, 2024

• added timing table and modified readme

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• modified readme file

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• more timing changes to readme

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• MIT license

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