change name from tasks to pipelines

HumanCellAtlas · Dec 15, 2017 · 1db468f · 1db468f
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commit 1db468f
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diff --git a/...2_single_sample/tasks/hisat2_pipeline.wdl → ...ngle_sample/pipelines/hisat2_pipeline.wdl b/...2_single_sample/tasks/hisat2_pipeline.wdl → ...ngle_sample/pipelines/hisat2_pipeline.wdl
diff --git a/...gle_sample/tasks/hisat2_rsem_pipeline.wdl → ...sample/pipelines/hisat2_rsem_pipeline.wdl b/...gle_sample/tasks/hisat2_rsem_pipeline.wdl → ...sample/pipelines/hisat2_rsem_pipeline.wdl
diff --git a/...single_sample/tasks/kallisto_pipeline.wdl → ...le_sample/pipelines/kallisto_pipeline.wdl b/...single_sample/tasks/kallisto_pipeline.wdl → ...le_sample/pipelines/kallisto_pipeline.wdl
diff --git a/...seq2_single_sample/tasks/run_pipeline.wdl → ..._single_sample/pipelines/run_pipeline.wdl b/...seq2_single_sample/tasks/run_pipeline.wdl → ..._single_sample/pipelines/run_pipeline.wdl
diff --git a/..._single_sample/tasks/run_pipeline_ind.wdl → ...gle_sample/pipelines/run_pipeline_ind.wdl b/..._single_sample/tasks/run_pipeline_ind.wdl → ...gle_sample/pipelines/run_pipeline_ind.wdl
diff --git a/...eq2_single_sample/tasks/star_pipeline.wdl → ...single_sample/pipelines/star_pipeline.wdl b/...eq2_single_sample/tasks/star_pipeline.wdl → ...single_sample/pipelines/star_pipeline.wdl
diff --git a/...s/test_pipeline/hisat2_pipeline_test.json → ...s/test_pipeline/hisat2_pipeline_test.json b/...s/test_pipeline/hisat2_pipeline_test.json → ...s/test_pipeline/hisat2_pipeline_test.json
diff --git a/...test_pipeline/kallisto_pipeline_test.json → ...test_pipeline/kallisto_pipeline_test.json b/...test_pipeline/kallisto_pipeline_test.json → ...test_pipeline/kallisto_pipeline_test.json
diff --git a/...asks/test_pipeline/run_pipeline_test.json → ...ines/test_pipeline/run_pipeline_test.json b/...asks/test_pipeline/run_pipeline_test.json → ...ines/test_pipeline/run_pipeline_test.json
diff --git a/...sks/test_pipeline/star_pipeline_test.json → ...nes/test_pipeline/star_pipeline_test.json b/...sks/test_pipeline/star_pipeline_test.json → ...nes/test_pipeline/star_pipeline_test.json
diff --git a/...le_sample/tasks/test_wdl/test_hisat2.json → ...ample/pipelines/test_wdl/test_hisat2.json b/...le_sample/tasks/test_wdl/test_hisat2.json → ...ample/pipelines/test_wdl/test_hisat2.json
diff --git a/...gle_sample/tasks/test_wdl/test_hisat2.wdl → ...sample/pipelines/test_wdl/test_hisat2.wdl b/...gle_sample/tasks/test_wdl/test_hisat2.wdl → ...sample/pipelines/test_wdl/test_hisat2.wdl