Merge pull request #66 from HumanCellAtlas/ss2-rename-outputs

Rename SS2 outputs to have unique names.
HumanCellAtlas · Jan 5, 2018 · 52ed46b · 52ed46b
2 parents 55feb62 + 96da3d8
commit 52ed46b
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/smartseq2_single_sample/ss2_single_sample.wdl b/smartseq2_single_sample/ss2_single_sample.wdl
@@ -39,7 +39,7 @@ workflow SmartSeq2SingleCell {
       hisat2_ref = hisat2_ref_index,
       hisat2_ref_name = hisat2_ref_name,
       sample_name = sample_name,
-      output_prefix = output_name
+      output_prefix = output_name + "_qc"
 
   }
 
@@ -50,7 +50,7 @@ workflow SmartSeq2SingleCell {
       hisat2_ref_trans = hisat2_ref_trans_index,
       hisat2_ref_trans_name = hisat2_ref_trans_name,
       rsem_genome = rsem_ref_index,
-      output_prefix = output_name,
+      output_prefix = output_name + "_rsem",
       sample_name = sample_name
   }