AlphaPulldown-CI-CD

build af3 dependencies on top of AP #1339

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Run time

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Job	Run time
build-alphafold3-container	3m 0s
build-alphafold3-container	2m 55s
build-alphalink-container	10m 11s
build-alphalink-container	19m 7s
build-and-test (3.10, user)	4m 25s
build-and-test (3.10, user)	4m 25s
build-and-test (3.10, developer)	5m 23s
build-and-test (3.10, developer)	5m 23s
build-analysis-container	3m 9s
build-analysis-container	3m 9s
build-fold-container	8m 30s
build-fold-container	8m 30s
build-and-test (3.11, user)	4m 1s
build-and-test (3.11, user)	4m 1s
build-and-test (3.11, developer)	4m 2s
build-and-test (3.11, developer)	4m 2s
	1h 34m 13s