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install mamba
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DimaMolod committed Oct 30, 2024
1 parent 82af84a commit 15e1233
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/github_actions.yml
Original file line number Diff line number Diff line change
Expand Up @@ -35,7 +35,7 @@ jobs:
echo "$GITHUB_WORKSPACE/alphapulldown" >> $GITHUB_PATH
- if: matrix.install-type == 'user'
run: |
conda install --solver=classic -y -c conda-forge conda-libmamba-solver libmamba libmambapy libarchive
conda install -y -c conda-forge mamba
mamba create -n AlphaPulldown -c omnia -c bioconda -c conda-forge python==${{ matrix.python-version }} \
openmm==8.0 pdbfixer==1.9 kalign2 hmmer hhsuite modelcif
eval "$(conda shell.bash hook)"
Expand All @@ -45,7 +45,7 @@ jobs:
mamba install -c conda-forge biopython==1.81 importlib_metadata pytest # REMOVE AFTER UPDATING THE PYPI RELEASE VERSION!
- if: matrix.install-type == 'developer'
run: |
conda install --solver=classic -y -c conda-forge conda-libmamba-solver libmamba libmambapy libarchive
conda install -y -c conda-forge mamba
mamba create -n AlphaPulldown -c omnia -c bioconda -c conda-forge python==${{ matrix.python-version }} \
openmm==8.0 pdbfixer==1.9 kalign2 hmmer hhsuite modelcif
eval "$(conda shell.bash hook)"
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