API: improve database queries

[jmaupetit]

Purpose

The request user is injected in every API endpoint. Not prefetching related objects such as groups and operational units generates a huge number of unexpected queries and slows down API response time.

Proposal

• prefetch user-related groups and operational units
• improve bulk endpoints permissions checking

[jmaupetit]

This is work is related to #179

[github-actions]

Current benchmark

Type	Name	Request Count	Failure Count	Median Response Time	Average Response Time	Min Response Time	Max Response Time	Average Content Size	Requests/s	Failures/s	50%	66%	75%	80%	90%	95%	98%	99%	99.9%	99.99%	100%	git	timestamp	version
GET	/auth/whoami	29	0	680.0	763.4085177241378	14.024212000009584	2229.70069500002	160.0	0.9994515846752628	0.0	680	950	1100	1200	1600	2200	2200	2200	2200	2200	2200	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
POST	/dynamique/session/	21	0	480.0	778.5714072857145	12.520840999997064	2830.3657170000065	45.0	0.72374080269588	0.0	480	850	1000	1300	2200	2500	2800	2800	2800	2800	2800	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
POST	/dynamique/session/bulk	31	0	790.0	834.4799234838657	39.88664299998845	2165.2583300000288	411.0	1.0683792801701086	0.0	790	1200	1400	1400	1600	2000	2200	2200	2200	2200	2200	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
GET	/dynamique/status/	30	0	400.0	753.8158720999994	15.38997299999778	2545.4519589999904	285.0	1.0339154324226858	0.0	480	960	1400	1600	1900	2000	2500	2500	2500	2500	2500	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
POST	/dynamique/status/	33	0	920.0	1008.6386725454528	15.98396800000046	2552.004898000007	45.0	1.1373069756649543	0.0	920	1300	1600	2000	2100	2300	2600	2600	2600	2600	2600	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
GET	/dynamique/status/FRALLEGO002006P3	34	0	380.0	654.8573842058871	15.61049899999034	2178.0332320000184	276.7058823529412	1.1717708234123771	0.0	500	790	1100	1300	1600	2000	2200	2200	2200	2200	2200	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
GET	/dynamique/status/FRALLEGO002006P3/history	28	0	600.0	1035.97130821429	15.77455899999336	2798.890265000012	52236.71428571428	0.96498773692784	0.0	770	1400	1800	2000	2500	2500	2800	2800	2800	2800	2800	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
POST	/dynamique/status/bulk	30	0	580.0	870.5320791333293	25.30209100001457	2831.265218999988	411.0	1.0339154324226858	0.0	580	870	1400	1600	2100	2700	2800	2800	2800	2800	2800	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
POST	/statique/	19	7	920.0	1063.773145842107	47.17572399999881	2520.259102000012	59.36842105263158	0.6548131072010343	0.24124693423196	920	1400	1600	1700	2300	2500	2500	2500	2500	2500	2500	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
GET	/statique/?limit=10	28	0	750.0	943.4246961785744	29.283504999995102	2552.1679849999828	13826.32142857143	0.96498773692784	0.0	760	1300	1600	2000	2300	2500	2600	2600	2600	2600	2600	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
GET	/statique/?limit=100	30	0	740.0	1028.414871333327	149.8223019999898	2690.0347929999957	129006.36666666668	1.0339154324226858	0.0	860	1100	1500	2000	2300	2600	2700	2700	2700	2700	2700	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
PUT	/statique/FR073EP7QU5233	30	0	570.0	867.1347487000056	85.14588400001344	2523.4783590000234	1371.0	1.0339154324226858	0.0	570	850	1400	1600	2200	2300	2500	2500	2500	2500	2500	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
GET	/statique/FRALLEGO002006P3	31	0	510.0	889.2607643870931	26.457209000000148	2570.6753289999824	1202.0	1.0683792801701086	0.0	510	1200	1500	1500	2100	2600	2600	2600	2600	2600	2600	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
POST	/statique/bulk	28	0	1200.0	1333.774997785717	395.3573950000191	2533.7914240000146	1129.178571428571	0.96498773692784	0.0	1400	1400	1900	2000	2300	2300	2500	2500	2500	2500	2500	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0
	Aggregated	402	7	750.0	910.5782092487556	12.520840999997064	2831.265218999988	14629.830845771145	13.854466794463988	0.24124693423196	760	1100	1400	1600	2100	2300	2600	2700	2800	2800	2800	f85ecea	2024-12-12 16:35:55.849929+00:00	0.16.0

Comparison with the latest previous benchmark

A lower (negative) value means the current version performs better than the previous one.

Type	Name	Request Count	Failure Count	Median Response Time	Average Response Time	Min Response Time	Max Response Time	Average Content Size	Requests/s
GET	/auth/whoami
POST	/dynamique/session/
POST	/dynamique/session/bulk
GET	/dynamique/status/
POST	/dynamique/status/
GET	/dynamique/status/FRALLEGO002006P3
GET	/dynamique/status/FRALLEGO002006P3/history
POST	/dynamique/status/bulk
POST	/statique/
GET	/statique/?limit=10
GET	/statique/?limit=100
PUT	/statique/FR073EP7QU5233
GET	/statique/FRALLEGO002006P3
POST	/statique/bulk
	Aggregated