Merge pull request #146 from sylvinite/master

Fix to add piper module to sbatch
NationalGenomicsInfrastructure · Sep 22, 2016 · 184a40a · 184a40a
2 parents 08bbca2 + c9d2b44
commit 184a40a
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/roles/ngi_pipeline/templates/irma_ngi_config.yaml.j2 b/roles/ngi_pipeline/templates/irma_ngi_config.yaml.j2
@@ -21,8 +21,7 @@ piper:
     #sample:
     #    required_autosomal_coverage: 28.4
     load_modules:
-        - bioinfo-tools
-        - piper/{{ piper_module_version }}
+        - bioinfo-tools piper/{{ piper_module_version }}
         - R/3.2.3
     threads: 16
     job_walltime: